Sánchez Sorzano, Carlos Oscar Author
Marker-free image registration of electron tomography tilt-series
- Sanchez Sorzano, Carlos Oscar
- Messaoudi, Cedric
- Eibauer, Matthias
- Bilbao-Castro, J. R.
- Hegerl, R.
- Nickell, S.
- Marco, S.
- Carazo, J. M.
BMC BIOINFORMATICS - 27/04/2009
10.1186/1471-2105-10-124 View source
- JCR Quartile: Q1 (2009)
- SJR Quartile: Q1
- JCR Impact Factor: 3.428 (2009)
- Category normalized Impact: 1.733 (2009)
- CiteScore: 4.6 (2019)
- SJR: 1.626 (2019
- SNIP: 1.156 (2019
- JCR 5-year Impact Factor: 4.108
- JCR Categories: BIOCHEMICAL RESEARCH METHODS
- SJR Categories: Applied Mathematics (Q1); Biochemistry (Q1); Computer Science Applications (Q1); Molecular Biology (Q2); Structural Biology (Q2)
- Scopus
- ORCID
- Web of Science
Map challenge: Analysis using a pair comparison method based on Fourier shell correlation
- Marabini R.
- Kazemi M.
- Sorzano C.
- Carazo J.
Journal of Structural Biology - 3/12/2018
- SJR Quartile: Q1
- JCR Impact Factor: 3.754 (2018)
- CiteScore: 5.5 (2020)
- SJR: 5.254 (2018
- SNIP: 1.207 (2018
- JCR 5-year Impact Factor: 3.522
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Local resolution estimates of cryoEM reconstructions
- Vilas J.L.
- Heymann J.B.
- Tagare H.D.
- Ramirez-Aportela E.
- Carazo J.M.
- Sorzano C.O.S.
Current Opinion in Structural Biology - 1/10/2020
- SJR Quartile: Q1
- JCR Impact Factor: 6.809 (2020)
- CiteScore: 12.4 (2020)
- SJR: 3.935 (2020
- SNIP: 1.459 (2020
- JCR 5-year Impact Factor: 7.045
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Structural Biology (Q1); Molecular Biology (Q1)
- Scopus
- ORCID
- Web of Science
Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data
- Abrishami V.
- Ilca S.L.
- Gomez-Blanco J.
- Rissanen I.
- de la Rosa-Trevín J.M.
- Reddy V.S.
- Carazo J.M.
- Huiskonen J.T.
Progress in Biophysics and Molecular Biology - 1/1/2020
10.1016/j.pbiomolbio.2020.05.004
- SJR Quartile: Q1
- JCR Impact Factor: 3.667 (2020)
- CiteScore: 5.8 (2020)
- SJR: 0.859 (2020
- SNIP: 0.995 (2020
- JCR 5-year Impact Factor: 3.196
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Biophysics (Q1); Molecular Biology (Q2)
- Scopus
- ORCID
- Web of Science
Local defocus estimation in single particle analysis in cryo-electron microscopy
- Fernandez-Gimenez E.
- Carazo J.M.
- Sorzano C.O.S.
Journal of Structural Biology - 1/12/2023
- CiteScore: 6.1 (2022)
- SJR: 1.582 (2022
- SNIP: 0.773 (2022
- Scopus
- ORCID
Local analysis of strains and rotations for macromolecular electron microscopy maps
- Sorzano, C. O. S.
- Martin-Ramos, A.
- Prieto, F.
- Melero, R.
- Martin-Benito, J.
- Jonic, S.
- Navas-Calvente, J.
- Vargas, J.
- Oton, J.
- Abrishami, V.
- de la Rosa-Trevin, J. M.
- Gomez-Blanco, J.
- Vilas, J. L.
- Marabini, R.
- Carazo, J. M.
JOURNAL OF STRUCTURAL BIOLOGY - 1/07/2016
10.1016/j.jsb.2016.04.001 View source
- SJR Quartile: Q1
- JCR Impact Factor: 2.767 (2016)
- CiteScore: 5.5 (2020)
- SJR: 2.732 (2016
- SNIP: 0.904 (2016
- JCR 5-year Impact Factor: 3.235
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Large T antigen on the simian virus 40 origin of replication: a 3D snapshot prior to DNA replication
- Gomez-Lorenzo, MG
- Valle, M
- Frank, J
- Gruss, C
- Sorzano, COS
- Chen, XS
- Donate, LE
- Carazo, JM
EMBO JOURNAL - 1/12/2003
10.1093/emboj/cdg612 View source
- SJR Quartile: Q1
- JCR Impact Factor: 10.456 (2022)
- Category normalized Impact: 0.681 (2003)
- CiteScore: 17.4 (2020)
- SJR: 10.214 (2003
- SNIP: 2.023 (2003
- SJR Categories: Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Immunology and Microbiology (miscellaneous) (Q1); Medicine (miscellaneous) (Q1); Molecular Biology (Q1); Neuroscience (miscellaneous) (Q1)
- Scopus
- ORCID
- Web of Science
Large expert-curated database for benchmarking document similarity detection in biomedical literature search
- Brown P.
- Zhou Y.
- Tan A.C.
- El-Esawi M.A.
- Liehr T.
- Blanck O.
- Gladue D.P.
- Almeida G.M.F.
- Cernava T.
- Sorzano C.O.
- Yeung A.W.K.
- Engel M.S.
- Chandrasekaran A.R.
- Muth T.
- Staege M.S.
- Daulatabad S.V.
- Widera D.
- Zhang J.
- Meule A.
- Honjo K.
- Pourret O.
- Yin C.C.
- Zhang Z.
- Cascella M.
- Flegel W.A.
- Goodyear C.S.
- van Raaij M.J.
- Bukowy-Bieryllo Z.
- Campana L.G.
- Kurniawan N.A.
- Lalaouna D.
- Hüttner F.J.
- Ammerman B.A.
- Ehret F.
- Cobine P.A.
- Tan E.C.
- Han H.
- Xia W.
- McCrum C.
- Dings R.P.M.
- Marinello F.
- Nilsson H.
- Nixon B.
- Voskarides K.
- Yang L.
- Costa V.D.
- Bengtsson-Palme J.
- Bradshaw W.
- Grimm D.G.
- Kumar N.
- Martis E.
- Prieto D.
- Sabnis S.C.
- Amer S.E.D.R.
- Liew A.W.C.
- Perco P.
- Rahimi F.
- Riva G.
- Zhang C.
- Devkota H.P.
- Ogami K.
- Basharat Z.
- Fierz W.
- Siebers R.
- Tan K.H.
- Boehme K.A.
- Brenneisen P.
- Brown J.A.L.
- Dalrymple B.P.
- Harvey D.J.
- Ng G.
- Werten S.
- Bleackley M.
- Dai Z.
- Dhariwal R.
- Gelfer Y.
- Hartmann M.D.
- Miotla P.
- Tamaian R.
- Govender P.
- Gurney-Champion O.J.
- Kauppila J.H.
- Zhang X.
- Echeverría N.
- Subhash S.
- Sallmon H.
- Tofani M.
- Bae T.
- Bosch O.
- Cuív P.O.
- Danchin A.
- Diouf B.
- Eerola T.
- Evangelou E.
- Filipp F.
- Klump H.
- Kurgan L.
- Smith S.S.
- Terrier O.
- Tuttle N.
Database-The Journal of Biological Databases and Curation - 1/1/2019
- JCR Impact Factor: 2.593 (2019)
- CiteScore: 4.5 (2020)
- SJR: 2.248 (2019
- SNIP: 1.288 (2019
- JCR 5-year Impact Factor: 3.661
- JCR Categories: MATHEMATICAL & COMPUTATIONAL BIOLOGY
Iterative reconstruction for pet scanners with continuous scintillators.
- Iriarte A.
- Caffarena G.
- Lopez-Fernandez M.
- Garcia-Carmona R.
- Otero A.
- Sorzano C.
- Marabini R.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS - 4/08/2015
10.1109/embc.2015.7318842 View source
- CiteScore: 1.5 (2020)
- SJR: 0.263 (2015
- SNIP: 0.653 (2015
- Scopus
- ORCID
- Web of Science
Iterative Elastic 3D-to-2D Alignment Method Using Normal Modes for Studying Structural Dynamics of Large Macromolecular Complexes
- Jin, Qiyu
- Sorzano, Carlos Oscar S.
- Miguel de la Rosa-Trevin, Jose
- Roman Bilbao-Castro, Jose
- Nunez-Ramirez, Rafael
- Llorca, Oscar
- Tama, Florence
- Jonic, Slavica
STRUCTURE - 4/03/2014
10.1016/j.str.2014.01.004 View source
- JCR Quartile: Q1 (2014)
- SJR Quartile: Q1
- JCR Impact Factor: 5.618 (2022)
- Category normalized Impact: 2.174 (2014)
- CiteScore: 9 (2020)
- SJR: 4.544 (2014
- SNIP: 1.462 (2014
- JCR 5-year Impact Factor: 5.895
- JCR Categories: CELL BIOLOGY
- SJR Categories: Molecular Biology (Q1); Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Splines in Biomedical Image Processing
- Jonic S.
- Sorzano C.
Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011
- Scopus
- ORCID
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.156 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- SJR Quartile: Q3
- CiteScore: 2.2 (2020)
- SJR: 0.751 (2013
- SNIP: 0.362 (2013
- SJR Categories: Genetics (Q3); Molecular Biology (Q3)
- Scopus
- ORCID
Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes
- Devaux, Zaelle
- Sorzano, Carlos Oscar S.
- Jonic, Slavica
- Conn, PM
Methods in Cell Biology - 1/1/2012
10.1016/b978-0-12-405914-6.00016-0 View source
- JCR Quartile: Q2 (2012)
- JCR Impact Factor: 1.444 (2012)
- Category normalized Impact: 0.027 (2012)
- CiteScore: 2.8 (2020)
- SJR: 0.908 (2012
- JCR 5-year Impact Factor: 1.932
- JCR Categories: CELL BIOLOGY
- Scopus
- ORCID
- Web of Science
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.312 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- JCR Quartile: Q2 (2021)
- Category normalized Impact: 0.595 (2021)
- CiteScore: 2.2 (2020)
- SJR: 0.711 (2020
- SNIP: 0.57 (2020
- Scopus
- ORCID
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
Using Scipion for Stream Image Processing at CryoEM Facilities
- de la Rosa-Trevin, J. M.
- Gomez-Blanco, J.
- Conesa, P.
- Rancel, Y.
- del Cano, L.
- Arranz, R.
- Chichon, F. J.
- Martin-Benito, J.
- Carroni, M.
- Fleichman, S.
- Lindahl, E.
- Basham, M.
- Clare, D. K.
- Savage, K.
- Siebert, C. A.
- Ashton, A. W.
- Marabini, R.
- Sorzano, C. O. S.
- Carazo, J. M.
Acta Crystallographica Section A - Foundation and Advances - 07/2018
- JCR Impact Factor: 1.878 (2018)
- JCR 5-year Impact Factor: 4.647
- JCR Categories: CHEMISTRY, MULTIDISCIPLINARY
- ORCID
- Web of Science
Molecular image registration using mutual information and differential evolution optimization
- Telenczuk, Bartosz
- Ledesma-Carbayo, Marta J.
- Velazquez-Muriel, Javier A.
- Sorzano, Carlos O. S.
- Carazo, Jose-Maria
- Santos, Andres
- IEEE
2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano To Macro - Proceedings - 17/11/2006
- Scopus
- ORCID
- Web of Science
LocalDeblur: An automatic map sharpening by restauration of local resolution
- Ramirez-Aportela, E.
- Vilas, J. L.
- Carazo, J. M.
- Sanchez Sorzano, C. O.
European Biophysics Journal With Biophysics Letters - 07/2019
- JCR Impact Factor: 2.094 (2019)
- JCR 5-year Impact Factor: 1.888
- JCR Categories: BIOPHYSICS
- ORCID
- Web of Science
Intelligent alarms for patient supervision
- Otero A.
- Félix P.
- Palacios F.
- Pérez-Gandía C.
- Sorzano C.
2007 IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, CONFERENCE PROCEEDINGS BOOK - 1/12/2007
10.1109/wisp.2007.4447555 View source
- Scopus
- ORCID
- Web of Science
Improving 3D reconstructions of macromolecular conformations
- Kazemi, M.
- Sorzano, C. O. S.
- Georges, A. Des
- Carazo, J. M.
- Vargas, J.
Acta Crystallographica Section A - Foundation and Advances - 07/2018
- JCR Impact Factor: 1.878 (2018)
- JCR 5-year Impact Factor: 4.647
- JCR Categories: CHEMISTRY, MULTIDISCIPLINARY
- ORCID
- Web of Science
Grid computing in 3D-EM image processing using Xmipp
- Scheres, SHW
- Merino, AJ
- Sorzano, COS
- Carazo, JM
- IEEE Comp Soc
Proceedings - Ieee Symposium On Computer-based Medical Systems - 10/11/2005
10.1109/cbms.2005.60 View source
- CiteScore: 1.8 (2020)
- SJR: 0.194 (2005
- SNIP: 0.374 (2005
- Scopus
- ORCID
- Web of Science
Flexible image registration for the identification of best fitted protein models in 3D-EM maps
- Fernandez-de-Manuell, Laura
- Ledesma-Carbayol, Maria J.
- Atienza-Herrero, Julian
- Sorzano, Carlos O. S.
- Carazo, Jose-Maria
- Santos, Andres
- IEEE
2008 5th Ieee International Symposium On Biomedical Imaging: From Nano To Macro, Proceedings, Isbi - 10/05/2008
10.1109/isbi.2008.4541163 View source
- Scopus
- ORCID
- Web of Science
Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows
- Li M.
- Xu G.
- Sorzano C.
- Melero R.
- Bajaj C.
Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010
- SJR Categories: Biomedical Engineering; Health Informatics; Health Information Management
- Scopus
- ORCID
Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows
- Li, Ming
- Xu, Guoliang
- Sorzano, Carlos O. S.
- Melero, Roberto
- Bajaj, Chandrajit
- Yu, W
- Zhang, M
- Wang, L
- Song, Y
2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010
Elastic image registration with applications to proteomics
- Sorzano, C. O. S.
- Thevenaz, P.
- Valdes, I.
- Beloso, A.
- Unser, M.
- Cristobal, G
- Javidi, B
- Vallmitjana, S
INFORMATION OPTICS - 1/12/2006
- CiteScore: 0.7 (2020)
- SJR: 0.184 (2006
- SNIP: 0.204 (2006
- Scopus
- ORCID
- Web of Science
This author has no patents.
Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction
- Almudena Mendez-Perez
- Andres M Acosta-Moreno
- Carlos Wert-Carvajal
- Pilar Ballesteros-Cuartero
- Ruben Sanchez-Garcia
- Jose R Macias
- Rebeca Sanz-Pamplona
- Ramon Alemany
- Carlos Oscar S Sorzano
- Arrate Munoz-Barrutia
- Esteban Veiga
22/11/2023
- ORCID
The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation
- Tiziana Ginex
- Clara Marco-Marín
- Miłosz Wieczór
- Carlos P. Mata
- James Krieger
- Maria Luisa López-Redondo
- Clara Francés-Gómez
- Paula Ruiz-Rodriguez
- Roberto Melero
- Carlos Óscar Sánchez-Sorzano
- Marta Martínez
- Nadine Gougeard
- Alicia Forcada-Nadal
- Sara Zamora-Caballero
- Roberto Gozalbo-Rovira
- Carla Sanz-Frasquet
- Jeronimo Bravo
- Vicente Rubio
- Alberto Marina
- Ron Geller
- Iñaki Comas
- Carmen Gil
- Mireia Coscolla
- Modesto Orozco
- José Luis Llácer
- José-Maria Carazo
PLoS Pathogens - 7/12/2021
- JCR Impact Factor: 7.464 (2021)
- CiteScore: 10.5 (2021)
- SJR: 2.596 (2021
- SNIP: 1.618 (2021
- JCR 5-year Impact Factor: 7.913
- JCR Categories: VIROLOGY
- Scopus
- ORCID
- Web of Science
Statistical experiment design for animal research
- Carlos Oscar S. Sorzano
2/06/2023
- ORCID
Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing
- James Michael Krieger
- Carlos Oscar S. Sorzano
- Jose Maria Carazo
International Journal of Molecular Sciences - 10/08/2023
- CiteScore: 7.8 (2022)
- SJR: 1.154 (2022
- SNIP: 1.263 (2022
- Scopus
- ORCID
- Web of Science
Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression
- Q. Marín M
- Pérez P
- Gómez CE
- S. Sorzano CO
- Esteban M
- García-Arriaza J
05/2018
- ORCID
Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis
- Vargas J
- Melero R
- Gomez-Blanco J
- Carazo J
- Sorzano COS
11/2016
- ORCID
NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice
- Carlos Wert-Carvajal
- Rubén Sánchez-García
- José R Macías
- Rebeca Sanz-Pamplona
- Almudena Méndez Pérez
- Ramon Alemany
- Esteban Veiga Chacón
- Carlos Óscar S. Sorzano
- Arrate Muñoz-Barrutia
5/10/2020
- ORCID
Multitarget Virtual Screening for Drug Repurposing in COVID19
- Sorzano co
- Crisman E
- Carazo JM
- leon r
15/07/2020
- ORCID
Improvements on marker-free images alignment for electron tomography
- C.O.S. Sorzano
- F. de Isidro-Gómez
- E. Fernández-Giménez
- D. Herreros
- S. Marco
- J.M. Carazo
- C. Messaoudi
Journal of Structural Biology: X - 24/05/2020
- SJR Quartile: Q4
- JCR Impact Factor: 2.867 (2020)
- JCR 5-year Impact Factor: 4.474
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q4)
- Scopus
- ORCID
- Web of Science
Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming
- Blanca Soler Palacios
- Ricardo Villares
- Pilar Lucas
- Jose Miguel Rodriguez Frade
- Ana Cayuela
- Jonathan Gabriel Piccirillo
- David Delgado Gestoso
- Cristina Risco
- Fernando Corrales
- Carlos Oscar S Sorzano
- Nuria Martinez
- Jose Javier Conesa
- Francisco J. Iborra
- Mario Mellado
Frontiers in Immunology - 22/08/2022
- JCR Impact Factor: 7.3 (2022)
- JCR 5-year Impact Factor: 8
- JCR Categories: IMMUNOLOGY
- Scopus
- ORCID
h index
Scopus: 36
Web of Science: 42
i10 index
Scopus: 129
Web of Science: 163
Author profiles
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Research projects at UAL
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Acronym P10-TIC-06002Since: March 15, 2011Until: March 15, 2014Funded by: JUNTAFunding / grant amount: 105,730.00 EURRole: Investigador
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Acronym 99109Since: June 2, 1999Until: June 2, 2000Funded by: Ministerio de Asuntos ExterioresFunding / grant amount: 19,232.39 EURRole: Investigador