Sánchez Sorzano, Carlos Oscar Author
Hybrid Electron Microscopy Normal Mode Analysis with Scipion
- Harastani M.
- Sorzano C.
- Joni? S.
PROTEIN SCIENCE - 1/1/2020
- JCR Quartile: Q2 (2020)
- JCR Impact Factor: 3.876 (2022)
- Category normalized Impact: 0.806 (2020)
- CiteScore: 7.5 (2020)
- SJR: 3.353 (2020
- SNIP: 1.511 (2020
- JCR 5-year Impact Factor: 4.316
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
Scipion web tools: Easy to use cryo-EM image processing over the web
- Conesa Mingo, Pablo
- Gutierrez, Jose
- Quintana, Adrian
- de la Rosa Trevin, Jose Miguel
- Zaldivar-Peraza, Airen
- Cuenca Alba, Jesus
- Kazemi, Mohsen
- Vargas, Javier
- del Cano, Laura
- Segura, Joan
- Sorzano, Carlos Oscar S.
- Maria Carazo, Jose
PROTEIN SCIENCE - 1/01/2018
- SJR Quartile: Q1
- JCR Impact Factor: 2.42 (2018)
- CiteScore: 7.5 (2020)
- SJR: 1.566 (2018
- SNIP: 0.69 (2018
- JCR 5-year Impact Factor: 2.767
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Biochemistry (Q1); Medicine (miscellaneous) (Q1); Molecular Biology (Q2)
- Scopus
- ORCID
- Web of Science
State-dependent sequential allostery exhibited by chaperonin TRiC/CCT revealed by network analysis of Cryo-EM maps
- Zhang Y.
- Krieger J.
- Mikulska-Ruminska K.
- Kaynak B.
- Sorzano C.O.S.
- Carazo J.M.
- Xing J.
- Bahar I.
Progress in Biophysics and Molecular Biology - 1/1/2020
10.1016/j.pbiomolbio.2020.08.006
- SJR Quartile: Q1
- JCR Impact Factor: 3.667 (2020)
- CiteScore: 5.8 (2020)
- SJR: 0.859 (2020
- SNIP: 0.995 (2020
- JCR 5-year Impact Factor: 3.196
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Biophysics (Q1); Molecular Biology (Q2)
- Scopus
- ORCID
- Web of Science
A review of resolution measures and related aspects in 3D Electron Microscopy.
- Sorzano CO
- Vargas J
- Otón J
- Abrishami V
- de la Rosa-Trevín JM
- Gómez-Blanco J
- Vilas JL
- Marabini R
- Carazo JM
Progress in Biophysics and Molecular Biology - 1/03/2017
10.1016/j.pbiomolbio.2016.09.005 View source
- JCR Quartile: Q2 (2017)
- SJR Quartile: Q1
- JCR Impact Factor: 3.427 (2022)
- Category normalized Impact: 0.501 (2017)
- CiteScore: 5.8 (2020)
- SJR: 1.446 (2017
- SNIP: 1.236 (2017
- JCR 5-year Impact Factor: 3.125
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Biophysics (Q1); Molecular Biology (Q2)
- Scopus
- ORCID
- Web of Science
Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data
- Abrishami V.
- Ilca S.L.
- Gomez-Blanco J.
- Rissanen I.
- de la Rosa-Trevín J.M.
- Reddy V.S.
- Carazo J.M.
- Huiskonen J.T.
Progress in Biophysics and Molecular Biology - 1/1/2020
10.1016/j.pbiomolbio.2020.05.004
- SJR Quartile: Q1
- JCR Impact Factor: 3.667 (2020)
- CiteScore: 5.8 (2020)
- SJR: 0.859 (2020
- SNIP: 0.995 (2020
- JCR 5-year Impact Factor: 3.196
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Biophysics (Q1); Molecular Biology (Q2)
- Scopus
- ORCID
- Web of Science
NF kappa B activation by modified vaccinia virus as a novel strategy to enhance neutrophil migration and HIV-specific T-cell responses
- Di Pilato, Mauro
- Mejias-Perez, Ernesto
- Zonca, Manuela
- Perdiguero, Beatriz
- Elena Gomez, Carmen
- Trakala, Marianna
- Nieto, Jacobo
- Luis Najera, Jose
- Sorzano, Carlos Oscar S.
- Combadiere, Christophe
- Pantaleo, Giuseppe
- Planelles, Lourdes
- Esteban, Mariano
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 17/03/2015
10.1073/pnas.1424341112 View source
- SJR Quartile: Q1
- JCR Impact Factor: 9.423 (2015)
- CiteScore: 16.2 (2020)
- SJR: 6.814 (2015
- SNIP: 2.677 (2015
- JCR 5-year Impact Factor: 10.285
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- SJR Categories: Multidisciplinary (Q1)
- Scopus
- ORCID
- Web of Science
Structural analysis of receptors and actin polarity in platelet protrusions
- Sorrentino S.
- Conesa J.J.
- Cuervo A.
- Melero R.
- Martins B.
- Fernandez-Gimenez E.
- De Isidro-Gomez F.P.
- De la Morena J.
- Studt J.D.
- Sorzano C.O.S.
- Eibauer M.
- Carazo J.M.
- Medalia O.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 14/9/2021
- JCR Quartile: Q2 (2021)
- JCR Impact Factor: 12.779 (2022)
- Category normalized Impact: 1.064 (2021)
- CiteScore: 16.2 (2020)
- SJR: 5.011 (2020
- SNIP: 2.904 (2020
- JCR 5-year Impact Factor: 13.451
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- Scopus
- ORCID
- Web of Science
Iterative reconstruction for pet scanners with continuous scintillators.
- Iriarte A.
- Caffarena G.
- Lopez-Fernandez M.
- Garcia-Carmona R.
- Otero A.
- Sorzano C.
- Marabini R.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS - 4/08/2015
10.1109/embc.2015.7318842 View source
- CiteScore: 1.5 (2020)
- SJR: 0.263 (2015
- SNIP: 0.653 (2015
- Scopus
- ORCID
- Web of Science
Outlier detection for single particle analysis in Electron Microscopy
- Sorzano, C. O. S.
- Vargas, J.
- de la Rosa-Trevin, J. M.
- Zaldivar-Peraza, A.
- Oton, J.
- Abrishami, V.
- Foche, I.
- Marabini, R.
- Caffarena, G.
- Carazo, J. M.
- Ortuno, F
- Rojas, I
Proceedings Iwbbio 2014: International Work-Conference on Bioinformatics and Biomedical Engineering, Vols 1 and 2 - 2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 3.192 (2014)
- ORCID
- Web of Science
2D and 3D Alignment for Electron Microscopy via Graphics Processing Units
- Garcia, Eduardo
- Mateo, Miguel
- Deideri, Alessandro
- Iriarte, Ana
- Sorzano, Carlos O. S.
- Caffarena, Gabriel
- Ortuno, F
- Rojas, I
Proceedings Iwbbio 2014: International Work-Conference on Bioinformatics and Biomedical Engineering, Vols 1 and 2 - 2014
- JCR Quartile: Q2 (2014)
- ORCID
- Web of Science
Splines in Biomedical Image Processing
- Jonic S.
- Sorzano C.
Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011
- Scopus
- ORCID
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- JCR Quartile: Q2 (2021)
- Category normalized Impact: 0.595 (2021)
- CiteScore: 2.2 (2020)
- SJR: 0.711 (2020
- SNIP: 0.57 (2020
- Scopus
- ORCID
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- SJR Quartile: Q3
- CiteScore: 2.2 (2020)
- SJR: 0.751 (2013
- SNIP: 0.362 (2013
- SJR Categories: Genetics (Q3); Molecular Biology (Q3)
- Scopus
- ORCID
Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes
- Devaux, Zaelle
- Sorzano, Carlos Oscar S.
- Jonic, Slavica
- Conn, PM
Methods in Cell Biology - 1/1/2012
10.1016/b978-0-12-405914-6.00016-0 View source
- JCR Quartile: Q2 (2012)
- JCR Impact Factor: 1.444 (2012)
- Category normalized Impact: 0.027 (2012)
- CiteScore: 2.8 (2020)
- SJR: 0.908 (2012
- JCR 5-year Impact Factor: 1.932
- JCR Categories: CELL BIOLOGY
- Scopus
- ORCID
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.156 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.312 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Clustering of biomedical scientific papers
- Bravo-Alcobendas D.
- Sorzano C.
WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009
10.1109/wisp.2009.5286530 View source
- SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing
- Scopus
- ORCID
- Web of Science
Effects of the downsampling scheme on three-dimensional electron microscopy of single particles
- Sorzano, C. O. S.
- Iriarte, A.
- Marabini, R.
- Carazo, J. M.
- IEEE
WISP 2009 - 6th IEEE International Symposium on Intelligent Signal Processing - Proceedings - 10/08/2009
10.1109/wisp.2009.5286563 View source
- SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing
- Scopus
- ORCID
- Web of Science
Grid computing in 3D-EM image processing using Xmipp
- Scheres, SHW
- Merino, AJ
- Sorzano, COS
- Carazo, JM
- IEEE Comp Soc
Proceedings - Ieee Symposium On Computer-based Medical Systems - 10/11/2005
10.1109/cbms.2005.60 View source
- CiteScore: 1.8 (2020)
- SJR: 0.194 (2005
- SNIP: 0.374 (2005
- Scopus
- ORCID
- Web of Science
Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows
- Li M.
- Xu G.
- Sorzano C.
- Melero R.
- Bajaj C.
Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010
- SJR Categories: Biomedical Engineering; Health Informatics; Health Information Management
- Scopus
- ORCID
Elastic image registration with applications to proteomics
- Sorzano, C. O. S.
- Thevenaz, P.
- Valdes, I.
- Beloso, A.
- Unser, M.
- Cristobal, G
- Javidi, B
- Vallmitjana, S
INFORMATION OPTICS - 1/12/2006
- CiteScore: 0.7 (2020)
- SJR: 0.184 (2006
- SNIP: 0.204 (2006
- Scopus
- ORCID
- Web of Science
LocalDeblur: An automatic map sharpening by restauration of local resolution
- Ramirez-Aportela, E.
- Vilas, J. L.
- Carazo, J. M.
- Sanchez Sorzano, C. O.
European Biophysics Journal With Biophysics Letters - 07/2019
- JCR Impact Factor: 2.094 (2019)
- JCR 5-year Impact Factor: 1.888
- JCR Categories: BIOPHYSICS
- ORCID
- Web of Science
Consistent and elastic registration of histological sections using vector-spline regularization
- Arganda-Carreras, Ignacio
- Sorzano, Carlos O. S.
- Marabini, Roberto
- Carazo, Jose Maria
- Ortiz-de-Solorzano, Carlos
- Kybic, Jan
- Beichel, RR
COMPUTER VISION APPROACHES TO MEDICAL IMAGE ANALYSIS - 1/1/2006
10.1007/11889762_8 View source
- CiteScore: 1.8 (2020)
- SJR: 0.317 (2006
- SNIP: 0.679 (2006
- Scopus
- ORCID
- Web of Science
Using Scipion for Stream Image Processing at CryoEM Facilities
- de la Rosa-Trevin, J. M.
- Gomez-Blanco, J.
- Conesa, P.
- Rancel, Y.
- del Cano, L.
- Arranz, R.
- Chichon, F. J.
- Martin-Benito, J.
- Carroni, M.
- Fleichman, S.
- Lindahl, E.
- Basham, M.
- Clare, D. K.
- Savage, K.
- Siebert, C. A.
- Ashton, A. W.
- Marabini, R.
- Sorzano, C. O. S.
- Carazo, J. M.
Acta Crystallographica Section A - Foundation and Advances - 07/2018
- JCR Impact Factor: 1.878 (2018)
- JCR 5-year Impact Factor: 4.647
- JCR Categories: CHEMISTRY, MULTIDISCIPLINARY
- ORCID
- Web of Science
Improving 3D reconstructions of macromolecular conformations
- Kazemi, M.
- Sorzano, C. O. S.
- Georges, A. Des
- Carazo, J. M.
- Vargas, J.
Acta Crystallographica Section A - Foundation and Advances - 07/2018
- JCR Impact Factor: 1.878 (2018)
- JCR 5-year Impact Factor: 4.647
- JCR Categories: CHEMISTRY, MULTIDISCIPLINARY
- ORCID
- Web of Science
A fuzzy constraint satisfaction approach to identify and characterize apnea episodes
- Otero A.
- Sorzano C.
- Félix P.
- Álvarez M.
- Zamarrón C.
2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 - 1/1/2008
- SJR Categories: Biomedical Engineering; Biotechnology
- Scopus
- ORCID
This author has no patents.
Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction
- Almudena Mendez-Perez
- Andres M Acosta-Moreno
- Carlos Wert-Carvajal
- Pilar Ballesteros-Cuartero
- Ruben Sanchez-Garcia
- Jose R Macias
- Rebeca Sanz-Pamplona
- Ramon Alemany
- Carlos Oscar S Sorzano
- Arrate Munoz-Barrutia
- Esteban Veiga
22/11/2023
- ORCID
ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions
- Kazemi M
- Sorzano COS
- Des Georges A
- Carazo JM
- Vargas J
08/2018
- ORCID
Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis
- Vargas J
- Melero R
- Gomez-Blanco J
- Carazo J
- Sorzano COS
11/2016
- ORCID
DeepEMhancer: a deep learning solution for cryo-EM volume post-processing
- Ruben Sanchez Garcia
- Josue Gomez-Blanco
- Ana Cuervo
- Jose Maria Carazo
- Carlos Oscar S Sorzano
- Javier Vargas
13/06/2020
- ORCID
NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice
- Carlos Wert-Carvajal
- Rubén Sánchez-García
- José R Macías
- Rebeca Sanz-Pamplona
- Almudena Méndez Pérez
- Ramon Alemany
- Esteban Veiga Chacón
- Carlos Óscar S. Sorzano
- Arrate Muñoz-Barrutia
5/10/2020
- ORCID
Multitarget Virtual Screening for Drug Repurposing in COVID19
- Sorzano co
- Crisman E
- Carazo JM
- leon r
15/07/2020
- ORCID
Statistical experiment design for animal research
- Carlos Oscar S. Sorzano
2/06/2023
- ORCID
Automatic local resolution-based sharpening of cryo-EM maps.
- Ramirez-Aportela E
- Vilas JL
- Melero R
- Conesa P
- Martinez M
- Maluenda D
- Mota J
- Jimenez A
- Vargas J
- Marabini R
- Carazo JM
- Sorzano COS
10/2018
- ORCID
ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions
- Kazemi M.
- Sorzano C.O.S.
- Carazo J.M.
- Georges A.d.
- Abrishami V.
- Vargas J.
Progress In Biophysics & Molecular Biology - 1/09/2021
10.1016/j.pbiomolbio.2021.01.001
- JCR Impact Factor: 4.799 (2021)
- CiteScore: 5.8 (2020)
- SJR: 0.859 (2020
- SNIP: 0.995 (2020
- JCR 5-year Impact Factor: 3.907
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Scopus
- ORCID
- Web of Science
Erratum: The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation (PLoS Pathog (2022) 18:7 (e1010631) DOI: 10.1371/journal.ppat.1010631)
- Ginex T.
- Marco-Marín C.
- Wieczór M.
- Mata C.
- Krieger J.
- Ruiz-Rodriguez P.
- López-Redondo M.L.
- Francés-Gómez C.
- Melero R.
- Sánchez-Sorzano C.Ó.
- Martínez M.
- Gougeard N.
- Forcada-Nadal A.
- Zamora-Caballero S.
- Gozalbo-Rovira R.
- Sanz-Frasquet C.
- Arranz R.
- Bravo J.
- Rubio V.
- Marina A.
- Geller R.
- Comas I.
- Gil C.
- Coscolla M.
- Orozco M.
- Llácer J.L.
- Carazo J.M.
PLoS Pathogens - 1/11/2022
- JCR Impact Factor: 6.7 (2022)
- CiteScore: 10.5 (2021)
- SJR: 2.596 (2021
- SNIP: 1.618 (2021
- JCR 5-year Impact Factor: 6.7
- JCR Categories: VIROLOGY
h index
Scopus: 36
Web of Science: 42
i10 index
Scopus: 129
Web of Science: 163
Author profiles
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Research projects at UAL
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Acronym P10-TIC-06002Since: March 15, 2011Until: March 15, 2014Funded by: JUNTAFunding / grant amount: 105,730.00 EURRole: Investigador
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Acronym 99109Since: June 2, 1999Until: June 2, 2000Funded by: Ministerio de Asuntos ExterioresFunding / grant amount: 19,232.39 EURRole: Investigador