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Sánchez Sorzano, Carlos Oscar Author

The Molecular Control of Calcitonin Receptor Signaling

  • Dal Maso E.
  • Glukhova A.
  • Zhu Y.
  • Garcia-Nafria J.
  • Tate C.G.
  • Atanasio S.
  • Reynolds C.A.
  • Ramírez-Aportela E.
  • Carazo J.M.
  • Hick C.A.
  • Furness S.G.B.
  • Hay D.L.
  • Liang Y.L.
  • Miller L.J.
  • Christopoulos A.
  • Wang M.W.
  • Wootten D.
  • Sexton P.M.
... View more Collapse

ACS PHARMACOLOGY & TRANSLATIONAL SCIENCE - 8/2/2019

10.1021/acsptsci.8b00056

Cite count: 36 (Web of Science) 25 (Scopus)

New Tools and Pipelines for Continuous Heterogeneity Analysis from Cryo-EM using Normal Modes and 3D Zernike Polynomials

  • Krieger, J.
  • Herreros, D.
  • Sorzano, C. O. S.
  • Carazo, J. M.

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 8/2022

10.1107/s2053273322096486

Cite count:
  • JCR Impact Factor: 1.8 (2022)
  • JCR 5-year Impact Factor: 2.2
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

Scipion for tomography: An expansion of Scipion software framework towards integration, reproducibility and validation in cryo-electron tomography

  • Federico P. de Isidro-Gómez
  • de la Morena, Jorge Jimenez
  • Pablo Conesa Mingo
  • David Herreros
  • Fernandez-Gimenez, Estrella
  • Fonseca, Yunior C.
  • Strelak, David
  • J.J. Conesa
  • Ana Cuervo
  • Patricia Losana
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo Garcia
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 8/2021

10.1107/s0108767321097610

Cite count:

Using Scipion for Stream Image Processing at CryoEM Facilities

  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Conesa, P.
  • Rancel, Y.
  • del Cano, L.
  • Arranz, R.
  • Chichon, F. J.
  • Martin-Benito, J.
  • Carroni, M.
  • Fleichman, S.
  • Lindahl, E.
  • Basham, M.
  • Clare, D. K.
  • Savage, K.
  • Siebert, C. A.
  • Ashton, A. W.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 7/2018

10.1107/s0108767318098380

Cite count:
  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

3DBionotes Covid-19 Edition

  • Macias JR
  • Sanchez-Garcia R
  • Conesa P
  • Ramirez-Aportela E
  • Martinez Gonzalez M
  • Wert-Carvajal C
  • Parra-Perez AM
  • Segura Mora J
  • Horrell S
  • Thorn A
  • Carazo JM
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ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 15/8/2021

10.1093/bioinformatics/btab397

Cite count:

Improving 3D reconstructions of macromolecular conformations

  • Kazemi, M.
  • Sorzano, C. O. S.
  • Georges, A. Des
  • Carazo, J. M.
  • Vargas, J.

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 7/2018

10.1107/s0108767318098446

Cite count:
  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

On the development of three new tools for organizing and sharing information in three-dimensional electron microscopy

  • Marabini, R.
  • MacIas, J.R.
  • Vargas, J.
  • Quintana, A.
  • Sorzano, C.O.S.
  • Carazo, J.M.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY - 1/5/2013

10.1107/s0907444913007038 View source

Cite count: 5 (Web of Science) 5 (Scopus)
  • JCR Impact Factor: 7.232 (2013)
  • CiteScore: 5.5 (2015)
  • JCR 5-year Impact Factor: 9.416
  • JCR Categories: CRYSTALLOGRAPHY

On bias, variance, overfitting, gold standard and consensus in single-particle analysis by cryo-electron microscopy

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Martínez M.
  • Ramírez-Aportela E.
  • Krieger J.
  • Melero R.
  • Cuervo A.
  • Conesa J.
  • Filipovic J.
  • Conesa P.
  • Del Caño L.
  • Fonseca Y.C.
  • Jiménez-de la Morena J.
  • Losana P.
  • Sánchez-García R.
  • Strelak D.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.P.
  • Herreros D.
  • Vilas J.L.
  • Marabini R.
  • Carazo J.M.
... View more Collapse

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY - 1/4/2022

10.1107/s2059798322001978

Cite count: 13 (Web of Science) 2 (Scopus)
  • JCR Quartile: Q2 (2022)
  • JCR Impact Factor: 2.2 (2022)
  • Category normalized Impact: 2.434 (2022)
  • JCR 5-year Impact Factor: 5.7
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY

<i>Scipion</i> Flexibility Hub: an integrative framework for advanced analysis of conformational heterogeneity in cryoEM

  • Herreros D.
  • Krieger J.M.
  • Fonseca Y.
  • Conesa P.
  • Harastani M.
  • Vuillemot R.
  • Hamitouche I.
  • Serrano Gutiérrez R.
  • Gragera M.
  • Melero R.
  • Jonic S.
  • Carazo J.M.
  • Sorzano C.O.S.
... View more Collapse

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY - 1/7/2023

10.1107/s2059798323004497

Cite count: 3 (Web of Science) 2 (Scopus)
  • JCR Impact Factor: 2.6 (2023)
  • CiteScore: 7.5 (2022)
  • SJR: 3.87 (2022
  • SNIP: 1.47 (2022
  • JCR 5-year Impact Factor: 5.2
  • JCR Categories: BIOCHEMICAL RESEARCH METHODS

Flexible workflows for on-the-fly electron-microscopy single-particle image processing using <i>Scipion</i>

  • Maluenda D.
  • Majtner T.
  • Horvath P.
  • Vilas J.
  • Jiménez-Moreno A.
  • Mota J.
  • Ramírez-Aportela E.
  • Sánchez-García R.
  • Conesa P.
  • Del Caño L.
  • Rancel Y.
  • Fonseca Y.
  • Martínez M.
  • Sharov G.
  • García C.
  • Strelak D.
  • Melero R.
  • Marabini R.
  • Carazo J.
  • Sorzano C.
... View more Collapse

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY - 1/10/2019

10.1107/s2059798319011860

Cite count: 13 (Web of Science) 8 (Scopus)
  • JCR Quartile: Q2 (2019)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.266 (2019)
  • Category normalized Impact: 0.902 (2019)
  • CiteScore: 6.6 (2019)
  • SJR: 3.906 (2019
  • SNIP: 1.429 (2019
  • JCR 5-year Impact Factor: 3.181
  • JCR Categories: BIOPHYSICS
  • SJR Categories: Structural Biology (Q1)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

LABORATORY METHODS IN CELL BIOLOGY: BIOCHEMISTRY AND CELL CULTURE - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • JCR Quartile: Q2 (2012)
  • JCR Impact Factor: 1.444 (2012)
  • Category normalized Impact: 0.027 (2012)
  • CiteScore: 2.8 (2020)
  • SJR: 0.908 (2012
  • JCR 5-year Impact Factor: 1.932
  • JCR Categories: CELL BIOLOGY
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 2.2 (2020)
  • SJR: 0.751 (2013
  • SNIP: 0.362 (2013
  • SJR Categories: Genetics (Q3); Molecular Biology (Q3)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Cite count: 3 (Scopus)

Grid computing in 3D-EM image processing using Xmipp

  • Scheres, SHW
  • Merino, AJ
  • Sorzano, COS
  • Carazo, JM
  • IEEE Comp Soc

18TH IEEE SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS, PROCEEDINGS - 10/11/2005

10.1109/cbms.2005.60 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.194 (2005
  • SNIP: 0.374 (2005

Volumetric constraints in 3D tomography applied to electron microscopy

  • Marabini R.
  • Herman G.
  • Sorzano C.
  • Carazo J.

2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS - 1/1/2002

10.1109/isbi.2002.1029339 View source

Cite count: 5 (Scopus)

3D reconstruction of 2D crystals from projections in real space

  • Marabini, R
  • Herman, GT
  • Sorzano, COS
  • Carazo, JM
  • Fernandez, JJ
  • Matej, S
  • IEEE
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2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS - 1/1/2002

10.1109/isbi.2002.1029351 View source

Cite count: 1 (Scopus)

AMON:: A software system for automatic generation of ontology mappings

  • Sanchez-Alberca, Alfredo
  • Garcia-Garcia, Raul
  • Sorzano, Carlos Oscar S.
  • Gutierrez-Cossio, Celia
  • Chagoyen, Monica
  • Lopez, Mariano Fernandez
  • Bento, C
  • Cardoso, A
  • Dias, G
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2005 PORTUGUESE CONFERENCE ON ARTIFICIAL INTELLIGENCE, PROCEEDINGS - 2005

10.1109/epia.2005.341277 View source

Cite count:

Molecular image registration using mutual information and differential evolution optimization

  • Telenczuk, Bartosz
  • Ledesma-Carbayo, Marta J.
  • Velazquez-Muriel, Javier A.
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
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2006 3RD IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: MACRO TO NANO, VOLS 1-3 - 17/11/2006

Cite count: 4 (Web of Science) 11 (Scopus)

Intelligent alarms for patient supervision

  • Otero A.
  • Félix P.
  • Palacios F.
  • Pérez-Gandía C.
  • Sorzano C.

2007 IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, CONFERENCE PROCEEDINGS BOOK - 1/12/2007

10.1109/wisp.2007.4447555 View source

Cite count: 1 (Web of Science) 7 (Scopus)

Flexible image registration for the identification of best fitted protein models in 3D-EM maps

  • Fernandez-de-Manuell, Laura
  • Ledesma-Carbayol, Maria J.
  • Atienza-Herrero, Julian
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
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2008 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1-4 - 10/05/2008

10.1109/isbi.2008.4541163 View source

Cite count:

Electric-Potential Reconstructions of Single Particles Using <i>L</i><SUP>2</SUP>-Gradient Flows

  • Li, Ming
  • Xu, Guoliang
  • Sorzano, Carlos O. S.
  • Melero, Roberto
  • Bajaj, Chandrajit
  • Yu, W
  • Zhang, M
  • Wang, L
  • Song, Y
... View more Collapse

2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010

Cite count:

Image processing for Cellular tomography using soft X-rays

  • Sorzano, C. O. S.
  • Oton, J.
  • Cuenca, J.
  • Zaldivar-Perez, A.
  • Caffarena, G.
  • Sanchez-Jimenez, J.
  • Messaoudi, C.
  • Marco, S.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE
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2012 9TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI) - 2012

Cite count:

AN IMAGE PROCESSING APPROACH TO THE SIMULATION OF ELECTRON MICROSCOPY VOLUMES OF ATOMIC STRUCTURES

  • Sorzano, C.O.S.
  • Vargas, J.
  • Oton, J.
  • Abrishami, V.
  • De La Rosa-Trevin, J.M.
  • Del Riego, S.
  • Fernandez-Alderete, A.
  • Martinez-Rey, C.
  • Marabini, R.
  • Carazo, J.M.
... View more Collapse

2014 IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP) - 28/01/2014

10.1109/icip.2014.7025420 View source

Cite count:
  • SJR Categories: Computer Vision and Pattern Recognition

This author has no patents.

Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression

  • Q. Marín M
  • Pérez P
  • Gómez CE
  • S. Sorzano CO
  • Esteban M
  • García-Arriaza J

05/2018

10.1101/330902

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
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5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v2

  • ORCID

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
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22/11/2023

10.1101/2023.11.22.568042

  • ORCID

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
... View more Collapse

10/2018

10.1101/433284

  • ORCID

Real-space heterogeneous reconstruction, refinement, and disentanglement of CryoEM conformational states with HetSIREN

  • David Herreros
  • Carlos Perez Mata
  • Chari Noddings
  • Deli Irene
  • James Michael Krieger
  • David Agard
  • Ming-Daw Tsai
  • Carlos Oscar S Sorzano
  • Jose Maria Carazo
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19/09/2024

10.1101/2024.09.16.613176

  • ORCID

Scopus: 36

Web of Science: 43

Scopus: 129

Web of Science: 174

Last data update: 11/22/24 7:57 AM
Next scheduled update: 11/23/24 3:00 AM