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Sánchez Sorzano, Carlos Oscar Author

3DBIONOTES: A unified, enriched and interactive view of macromolecular information

  • Tabas-Madrid, D.
  • Segura, J.
  • Sanchez-Garcia, R.
  • Cuenca-Alba, J.
  • Sorzano, C. O. S.
  • Carazo, J. M.

JOURNAL OF STRUCTURAL BIOLOGY - 1/5/2016

10.1016/j.jsb.2016.02.007 View source

Cite count: 6 (Web of Science) 6 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 2.767 (2016)
  • CiteScore: 5.5 (2020)
  • SJR: 2.732 (2016
  • SNIP: 0.904 (2016
  • JCR 5-year Impact Factor: 3.235
  • JCR Categories: CELL BIOLOGY
  • SJR Categories: Structural Biology (Q1)

3DBionotes Covid-19 Edition

  • Macias JR
  • Sanchez-Garcia R
  • Conesa P
  • Ramirez-Aportela E
  • Martinez Gonzalez M
  • Wert-Carvajal C
  • Parra-Perez AM
  • Segura Mora J
  • Horrell S
  • Thorn A
  • Carazo JM
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 15/8/2021

10.1093/bioinformatics/btab397

Cite count:

3DBIONOTES v2.0: a web server for the automatic annotation of macromolecular structures

  • Segura, Joan
  • Sanchez-Garcia, Ruben
  • Martinez, Marta
  • Cuenca-Alba, Jesus
  • Tabas-Madrid, Daniel
  • Sorzano, C. O. S.
  • Carazo, J. M.
... View more Collapse

BIOINFORMATICS - 15/11/2017

10.1093/bioinformatics/btx483 View source

Cite count: 15 (Web of Science) 16 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.481 (2017)
  • CiteScore: 9.9 (2020)
  • SJR: 6.14 (2017
  • SNIP: 2.546 (2017
  • JCR 5-year Impact Factor: 8.561
  • JCR Categories: BIOTECHNOLOGY & APPLIED MICROBIOLOGY
  • SJR Categories: Biochemistry (Q1); Computational Mathematics (Q1); Computational Theory and Mathematics (Q1); Computer Science Applications (Q1); Molecular Biology (Q1); Statistics and Probability (Q1)

3DBIONOTES v3.0: crossing molecular and structural biology data with genomic variations

  • Segura J.
  • Sanchez-Garcia R.
  • Sorzano C.
  • Carazo J.
  • Valencia A.

BIOINFORMATICS - 15/9/2019

10.1093/bioinformatics/btz118

Cite count: 9 (Web of Science) 3 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.61 (2019)
  • CiteScore: 9.9 (2020)
  • SJR: 3.567 (2019
  • SNIP: 1.864 (2019
  • JCR 5-year Impact Factor: 9.853
  • JCR Categories: BIOTECHNOLOGY & APPLIED MICROBIOLOGY
  • SJR Categories: Biochemistry (Q1); Computational Mathematics (Q1); Computational Theory and Mathematics (Q1); Computer Science Applications (Q1); Molecular Biology (Q1); Statistics and Probability (Q1)

3D Cryo-Electron Reconstruction of BmrA, a Bacterial Multidrug ABC Transporter in an Inward-Facing Conformation and in a Lipidic Environment

  • Fribourg, Pierre Frederic
  • Chami, Mohamed
  • Sorzano, Carlos Oscar S.
  • Gubellini, Francesca
  • Marabini, Roberto
  • Marco, Sergio
  • Jault, Jean-Michel
  • Levy, Daniel
... View more Collapse

JOURNAL OF MOLECULAR BIOLOGY - 15/5/2014

10.1016/j.jmb.2014.03.002 View source

Cite count: 24 (Web of Science) 21 (Scopus)
  • JCR Quartile: Q2 (2014)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.333 (2022)
  • Category normalized Impact: 0.657 (2014)
  • CiteScore: 8.5 (2020)
  • SJR: 2.823 (2014
  • SNIP: 1.107 (2014
  • JCR 5-year Impact Factor: 3.702
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
  • SJR Categories: Molecular Biology (Q1); Structural Biology (Q1)

3D electron microscopy of biological nanomachines: principles and applications

  • Sorzano, C. O. S.
  • Jonic, S.
  • Cottevieille, M.
  • Larquet, E.
  • Boisset, N.
  • Marco, S.

EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS - 1/11/2007

10.1007/s00249-007-0203-x View source

Cite count: 12 (Web of Science) 14 (Scopus)
  • JCR Quartile: Q2 (2007)
  • JCR Impact Factor: 2.238 (2022)
  • Category normalized Impact: 0.319 (2007)
  • CiteScore: 4.1 (2020)
  • SJR: 0.978 (2007
  • SNIP: 0.842 (2007
Open Access

3DEM Loupe: analysis of macromolecular dynamics using structures from electron microscopy

  • Nogales-Cadenas, R.
  • Jonic, S.
  • Tama, F.
  • Arteni, A. A.
  • Tabas-Madrid, D.
  • Vazquez, M.
  • Pascual-Montano, A.
  • Sorzano, C. O. S.
... View more Collapse

NUCLEIC ACIDS RESEARCH - 1/7/2013

10.1093/nar/gkt385 View source

Cite count: 13 (Web of Science) 11 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 8.808 (2013)
  • CiteScore: 23.5 (2020)
  • SJR: 6.801 (2013
  • SNIP: 2.226 (2013
  • JCR 5-year Impact Factor: 8.378
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
  • SJR Categories: Genetics (Q1)
Open Access

3DIANA: 3D Domain Interaction Analysis: A Toolbox for Quaternary Structure Modeling

  • Segura, Joan
  • Sanchez-Garcia, Ruben
  • Tabas-Madrid, Daniel
  • Cuenca-Alba, Jesus
  • Sorzano, Carlos Oscar S.
  • Maria Carazo, Jose

BIOPHYSICAL JOURNAL - 23/2/2016

10.1016/j.bpj.2015.11.3519 View source

Cite count: 15 (Web of Science) 11 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 3.656 (2016)
  • CiteScore: 6.3 (2020)
  • SJR: 1.988 (2016
  • SNIP: 1.042 (2016
  • JCR 5-year Impact Factor: 3.743
  • JCR Categories: BIOPHYSICS
  • SJR Categories: Biophysics (Q1)

3-D reconstruction of 2-D crystals in real space

  • Marabini, R
  • Sorzano, COS
  • Matej, S
  • Fernandez, JJ
  • Carazo, JM
  • Herman, GT

IEEE TRANSACTIONS ON IMAGE PROCESSING - 1/4/2004

10.1109/tip.2003.822620 View source

Cite count: 16 (Web of Science) 16 (Scopus)
  • JCR Quartile: Q1 (2004)
  • SJR Quartile: Q1
  • JCR Impact Factor: 2.011 (2022)
  • Category normalized Impact: 0.483 (2004)
  • CiteScore: 16.3 (2020)
  • SJR: 1.315 (2004
  • SNIP: 4.401 (2004
  • SJR Categories: Computer Graphics and Computer-Aided Design (Q1); Software (Q1)
Open Access

A Candidate HIV/AIDS Vaccine (MVA-B) Lacking Vaccinia Virus Gene <i>C6L</i> Enhances Memory HIV-1-Specific T-Cell Responses

  • Garcia-Arriaza, Juan
  • Luis Najera, Jose
  • Gomez, Carmen E.
  • Tewabe, Nolawit
  • Sorzano, Carlos Oscar S.
  • Calandra, Thierry
  • Roger, Thierry
  • Esteban, Mariano
... View more Collapse

PLOS ONE - 31/8/2011

10.1371/journal.pone.0024244 View source

Cite count: 63 (Web of Science) 62 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.092 (2011)
  • CiteScore: 5.3 (2020)
  • SJR: 2.425 (2011
  • SNIP: 1.255 (2011
  • JCR 5-year Impact Factor: 4.537
  • JCR Categories: BIOLOGY
  • SJR Categories: Agricultural and Biological Sciences (miscellaneous) (Q1); Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Medicine (miscellaneous) (Q1)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

LABORATORY METHODS IN CELL BIOLOGY: BIOCHEMISTRY AND CELL CULTURE - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • JCR Quartile: Q2 (2012)
  • JCR Impact Factor: 1.444 (2012)
  • Category normalized Impact: 0.027 (2012)
  • CiteScore: 2.8 (2020)
  • SJR: 0.908 (2012
  • JCR 5-year Impact Factor: 1.932
  • JCR Categories: CELL BIOLOGY
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 2.2 (2020)
  • SJR: 0.751 (2013
  • SNIP: 0.362 (2013
  • SJR Categories: Genetics (Q3); Molecular Biology (Q3)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Cite count: 3 (Scopus)

2D and 3D Alignment for Electron Microscopy via Graphics Processing Units

  • Garcia, Eduardo
  • Mateo, Miguel
  • Deideri, Alessandro
  • Iriarte, Ana
  • Sorzano, Carlos O. S.
  • Caffarena, Gabriel
  • Ortuno, F
  • Rojas, I
... View more Collapse

PROCEEDINGS IWBBIO 2014: INTERNATIONAL WORK-CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING, VOLS 1 AND 2 - 2014

Cite count:
  • JCR Quartile: Q2 (2014)

3D reconstruction of 2D crystals from projections in real space

  • Marabini, R
  • Herman, GT
  • Sorzano, COS
  • Carazo, JM
  • Fernandez, JJ
  • Matej, S
  • IEEE
... View more Collapse

2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS - 1/1/2002

10.1109/isbi.2002.1029351 View source

Cite count: 1 (Scopus)

A fuzzy constraint satisfaction approach to identify and characterize apnea episodes

  • Otero A.
  • Sorzano C.
  • Félix P.
  • Álvarez M.
  • Zamarrón C.

2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 - 1/1/2008

10.1109/icbbe.2008.835

Cite count: 2 (Scopus)
  • SJR Categories: Biomedical Engineering; Biotechnology

AMON:: A software system for automatic generation of ontology mappings

  • Sanchez-Alberca, Alfredo
  • Garcia-Garcia, Raul
  • Sorzano, Carlos Oscar S.
  • Gutierrez-Cossio, Celia
  • Chagoyen, Monica
  • Lopez, Mariano Fernandez
  • Bento, C
  • Cardoso, A
  • Dias, G
... View more Collapse

2005 PORTUGUESE CONFERENCE ON ARTIFICIAL INTELLIGENCE, PROCEEDINGS - 2005

10.1109/epia.2005.341277 View source

Cite count:

AN IMAGE PROCESSING APPROACH TO THE SIMULATION OF ELECTRON MICROSCOPY VOLUMES OF ATOMIC STRUCTURES

  • Sorzano, C.O.S.
  • Vargas, J.
  • Oton, J.
  • Abrishami, V.
  • De La Rosa-Trevin, J.M.
  • Del Riego, S.
  • Fernandez-Alderete, A.
  • Martinez-Rey, C.
  • Marabini, R.
  • Carazo, J.M.
... View more Collapse

2014 IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP) - 28/01/2014

10.1109/icip.2014.7025420 View source

Cite count:
  • SJR Categories: Computer Vision and Pattern Recognition

Clustering of Biomedical Scientific Papers

  • Bravo-Alcobendas D.
  • Sorzano C.

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009

10.1109/wisp.2009.5286530 View source

Cite count: 3 (Web of Science) 2 (Scopus)
  • SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing

Effects of the Downsampling Scheme on Three-dimensional Electron Microscopy of Single Particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/08/2009

10.1109/wisp.2009.5286563 View source

Cite count: 3 (Scopus)
  • SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing

Effects of uneven sampling in 3D reconstructions.

  • Sorzano, COS
  • Marabini, R
  • Carazo, JM
  • Rietzel, E
  • Schroeder, R
  • Herman, GT
  • Boisset, N
  • Benavides, HAC
  • Yacaman, MJ
... View more Collapse

ELECTRON MICROSCOPY 1998, VOL 1 - 1998

Cite count:

ELASTIC IMAGE REGISTRATION TO FULLY EXPLORE MACROMOLECULAR DYNAMICS BY ELECTRON MICROSCOPY

  • Jin Q.
  • Sorzano C.
  • Callebaut I.
  • Tama F.
  • Jonic S.

2014 IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP) - 28/1/2014

10.1109/icip.2014.7025416 View source

Cite count:
  • SJR Categories: Computer Vision and Pattern Recognition

Elastic image registration with applications to proteomics

  • Sorzano, C. O. S.
  • Thevenaz, P.
  • Valdes, I.
  • Beloso, A.
  • Unser, M.
  • Cristobal, G
  • Javidi, B
  • Vallmitjana, S
... View more Collapse

INFORMATION OPTICS - 1/12/2006

10.1063/1.2361232 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 0.7 (2020)
  • SJR: 0.184 (2006
  • SNIP: 0.204 (2006

This author has no patents.

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
... View more Collapse

10/2018

10.1101/433284

  • ORCID

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v2

  • ORCID

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
... View more Collapse

5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

Real-space heterogeneous reconstruction, refinement, and disentanglement of CryoEM conformational states with HetSIREN

  • David Herreros
  • Carlos Perez Mata
  • Chari Noddings
  • Deli Irene
  • James Michael Krieger
  • David Agard
  • Ming-Daw Tsai
  • Carlos Oscar S Sorzano
  • Jose Maria Carazo
... View more Collapse

19/09/2024

10.1101/2024.09.16.613176

  • ORCID

Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression

  • Q. Marín M
  • Pérez P
  • Gómez CE
  • S. Sorzano CO
  • Esteban M
  • García-Arriaza J

05/2018

10.1101/330902

  • ORCID

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
... View more Collapse

22/11/2023

10.1101/2023.11.22.568042

  • ORCID

Scopus: 36

Web of Science: 43

Scopus: 129

Web of Science: 174

Last data update: 11/22/24 7:57 AM
Next scheduled update: 11/23/24 3:00 AM