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Sánchez Sorzano, Carlos Oscar Author

ZART: A Novel Multiresolution Reconstruction Algorithm with Motion-blur Correction for Single Particle Analysis

  • Herreros D.
  • Kiska J.
  • Ramírez-Aportela E.
  • Filipovic J.
  • Carazo J.M.
  • Sorzano C.O.S.

JOURNAL OF MOLECULAR BIOLOGY - 1/5/2023

10.1016/j.jmb.2023.168088

Cite count: 3 (Web of Science) 3 (Scopus)
  • JCR Impact Factor: 4.7 (2023)
  • CiteScore: 10.8 (2022)
  • SJR: 2.421 (2022
  • SNIP: 1.281 (2022
  • JCR 5-year Impact Factor: 4.9
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
Open Access

XTEND: Extending the depth of field in cryo soft X-ray tomography

  • Otón J.
  • Pereiro E.
  • Conesa J.
  • Chichón F.
  • Luque D.
  • Rodríguez J.
  • Pérez-Berná A.
  • Sorzano C.
  • Klukowska J.
  • Herman G.
  • Vargas J.
  • Marabini R.
  • Carrascosa J.
  • Carazo J.
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SCIENTIFIC REPORTS - 4/4/2017

10.1038/srep45808

Cite count: 14 (Web of Science) 12 (Scopus)
  • JCR Quartile: Q1 (2017)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.122 (2022)
  • Category normalized Impact: 0.886 (2017)
  • CiteScore: 7.1 (2020)
  • SJR: 1.533 (2017
  • SNIP: 1.263 (2017
  • JCR 5-year Impact Factor: 4.609
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • SJR Categories: Multidisciplinary (Q1)
Open Access

X-ray structure of full-length human RuvB-Like 2-mechanistic insights into coupling between ATP binding and mechanical action

  • Silva, Sara T. N.
  • Brito, Jose A.
  • Arranz, Rocio
  • Sorzano, Carlos Oscar S.
  • Ebel, Christine
  • Doutch, James
  • Tully, Mark D.
  • Carazo, Jose-Maria
  • Carrascosa, Jose L.
  • Matias, Pedro M.
  • Bandeiras, Tiago M.
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SCIENTIFIC REPORTS - 13/9/2018

10.1038/s41598-018-31997-z View source

Cite count: 19 (Web of Science) 10 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.011 (2018)
  • CiteScore: 4.29 (2018)
  • SJR: 1.414 (2018
  • SNIP: 1.24 (2018
  • JCR 5-year Impact Factor: 4.525
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • SJR Categories: Multidisciplinary (Q1)

XMSF: Structure-preserving noise reduction and pre-segmentation in microscope tomography

  • Bilbao-Castro J.
  • Sorzano C.
  • García I.
  • Fernández J.

BIOINFORMATICS - 1/11/2010

10.1093/bioinformatics/btq496

Cite count: 5 (Web of Science) 4 (Scopus)
  • JCR Quartile: Q1 (2010)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.877 (2010)
  • Category normalized Impact: 0.119 (2010)
  • CiteScore: 9.9 (2020)
  • SJR: 3.661 (2010
  • SNIP: 1.799 (2010
  • JCR 5-year Impact Factor: 6.326
  • JCR Categories: MATHEMATICAL & COMPUTATIONAL BIOLOGY
  • SJR Categories: Biochemistry (Q1); Computational Mathematics (Q1); Computational Theory and Mathematics (Q1); Computer Science Applications (Q1); Molecular Biology (Q1); Statistics and Probability (Q1)

XMIPP:: a new generation of an open-source image processing package for electron microscopy

  • Sorzano, C.O.S.
  • Marabini, R.
  • Velázquez-Muriel, J.
  • Bilbao-Castro, J.R.
  • Scheres, S.H.W.
  • Carazo, J.M.
  • Pascual-Montano, A.
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JOURNAL OF STRUCTURAL BIOLOGY - 1/11/2004

10.1016/j.jsb.2004.06.006 View source

Cite count: 387 (Web of Science) 363 (Scopus)
  • JCR Quartile: Q2 (2004)
  • SJR Quartile: Q2
  • JCR Impact Factor: 3.132 (2022)
  • Category normalized Impact: 6.073 (2004)
  • CiteScore: 5.5 (2020)
  • SJR: 2.385 (2004
  • SNIP: 1.286 (2004
  • SJR Categories: Structural Biology (Q2)

Xmipp 3.0: An improved software suite for image processing in electron microscopy

  • de la Rosa-Trevin, J. M.
  • Oton, J.
  • Marabini, R.
  • Zaldivar, A.
  • Vargas, J.
  • Carazo, J. M.
  • Sorzano, C. O. S.
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JOURNAL OF STRUCTURAL BIOLOGY - 1/11/2013

10.1016/j.jsb.2013.09.015 View source

Cite count: 228 (Web of Science) 172 (Scopus)
  • JCR Quartile: Q2 (2013)
  • SJR Quartile: Q1
  • JCR Impact Factor: 3.369 (2013)
  • Category normalized Impact: 5.507 (2013)
  • CiteScore: 5.5 (2020)
  • SJR: 2.596 (2013
  • SNIP: 1.256 (2013
  • JCR 5-year Impact Factor: 3.407
  • JCR Categories: CELL BIOLOGY
  • SJR Categories: Structural Biology (Q1)

Volurnetric restrictions in single particle 3DEM reconstruction

  • Sorzano, C.O.S.
  • Velázquez-Muriel, J.A.
  • Marabini, R.
  • Herman, G.T.
  • Carazo, J.M.

PATTERN RECOGNITION - 1/2/2008

10.1016/j.patcog.2007.06.010 View source

Cite count: 10 (Web of Science) 8 (Scopus)
  • JCR Quartile: Q2 (2008)
  • SJR Quartile: Q1
  • JCR Impact Factor: 3.279 (2022)
  • Category normalized Impact: 0.326 (2008)
  • CiteScore: 15.7 (2020)
  • SJR: 1.196 (2008
  • SNIP: 2.213 (2008
  • SJR Categories: Artificial Intelligence (Q1); Computer Vision and Pattern Recognition (Q1); Signal Processing (Q1); Software (Q1)

Virological and Immunological Characterization of Novel NYVAC-Based HIV/AIDS Vaccine Candidates Expressing Clade C Trimeric Soluble gp140(ZM96) and Gag(ZM96)-Pol-Nef(CN54) as Virus-Like Particles

  • Perdiguero, Beatriz
  • Elena Gomez, Carmen
  • Cepeda, Victoria
  • Sanchez-Sampedro, Lucas
  • Garcia-Arriaza, Juan
  • Mejias-Perez, Ernesto
  • Jimenez, Victoria
  • Sanchez, Cristina
  • Sorzano, Carlos Oscar S.
  • Carlos Oliveros, Juan
  • Delaloye, Julie
  • Roger, Thierry
  • Calandra, Thierry
  • Asbach, Benedikt
  • Wagner, Ralf
  • Kibler, Karen V.
  • Jacobs, Bertram L.
  • Pantaleo, Giuseppe
  • Esteban, Mariano
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JOURNAL OF VIROLOGY - 1/1/2015

10.1128/jvi.02469-14 View source

Cite count: 26 (Web of Science) 20 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.606 (2015)
  • CiteScore: 8.9 (2020)
  • SJR: 3.282 (2015
  • SNIP: 1.132 (2015
  • JCR 5-year Impact Factor: 4.428
  • JCR Categories: VIROLOGY
  • SJR Categories: Immunology (Q1); Insect Science (Q1); Microbiology (Q1); Virology (Q1)
Open Access

Versatility of Approximating Single-Particle Electron Microscopy Density Maps Using Pseudoatoms and Approximation-Accuracy Control

  • Jonic, Slavica
  • Sorzano, Carlos Oscar S.

BIOMED RESEARCH INTERNATIONAL - 1/1/2016

10.1155/2016/7060348 View source

Cite count: 8 (Web of Science) 5 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 2.476 (2016)
  • CiteScore: 4.1 (2020)
  • SJR: 0.885 (2016
  • SNIP: 0.964 (2016
  • JCR 5-year Impact Factor: 2.587
  • JCR Categories: MEDICINE, RESEARCH & EXPERIMENTAL
  • SJR Categories: Medicine (miscellaneous) (Q1); Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q2); Immunology and Microbiology (miscellaneous) (Q2)
Open Access

Variable Internal Flexibility Characterizes the Helical Capsid Formed by Agrobacterium VirE2 Protein on Single-Stranded DNA

  • Bharat, Tanmay A. M.
  • Zbaida, David
  • Eisenstein, Miriam
  • Frankenstein, Ziv
  • Mehlman, Tevie
  • Weiner, Lev
  • Sorzano, Carlos Oscar S.
  • Barak, Yoav
  • Albeck, Shira
  • Briggs, John A. G.
  • Wolf, Sharon G.
  • Elbaum, Michael
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STRUCTURE - 2/7/2013

10.1016/j.str.2013.04.027 View source

Cite count: 8 (Web of Science) 8 (Scopus)
  • JCR Quartile: Q2 (2013)
  • SJR Quartile: Q1
  • JCR Impact Factor: 6.794 (2013)
  • Category normalized Impact: 0.215 (2013)
  • CiteScore: 9 (2020)
  • SJR: 5.137 (2013
  • SNIP: 1.545 (2013
  • JCR 5-year Impact Factor: 6.337
  • JCR Categories: CELL BIOLOGY
  • SJR Categories: Molecular Biology (Q1); Structural Biology (Q1)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Cite count: 3 (Scopus)
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 2.2 (2020)
  • SJR: 0.751 (2013
  • SNIP: 0.362 (2013
  • SJR Categories: Genetics (Q3); Molecular Biology (Q3)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

LABORATORY METHODS IN CELL BIOLOGY: BIOCHEMISTRY AND CELL CULTURE - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • JCR Quartile: Q2 (2012)
  • JCR Impact Factor: 1.444 (2012)
  • Category normalized Impact: 0.027 (2012)
  • CiteScore: 2.8 (2020)
  • SJR: 0.908 (2012
  • JCR 5-year Impact Factor: 1.932
  • JCR Categories: CELL BIOLOGY

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Zero-loss P-contrast in EFTEM

  • Rietzel, E
  • Schorsch, P
  • Muller, H
  • Marabini, R
  • Sorzano, C
  • Carazo, JM
  • Schimpf, U
  • Leue, C
  • Holmes, KC
  • Schroder, RR
  • Benavides, HAC
  • Yacaman, MJ
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ELECTRON MICROSCOPY 1998, VOL 4 - 1998

Cite count:

Volumetric constraints in 3D tomography applied to electron microscopy

  • Marabini R.
  • Herman G.
  • Sorzano C.
  • Carazo J.

2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS - 1/1/2002

10.1109/isbi.2002.1029339 View source

Cite count: 5 (Scopus)

Outlier detection for single particle analysis in Electron Microscopy

  • Sorzano, C. O. S.
  • Vargas, J.
  • de la Rosa-Trevin, J. M.
  • Zaldivar-Peraza, A.
  • Oton, J.
  • Abrishami, V.
  • Foche, I.
  • Marabini, R.
  • Caffarena, G.
  • Carazo, J. M.
  • Ortuno, F
  • Rojas, I
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PROCEEDINGS IWBBIO 2014: INTERNATIONAL WORK-CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING, VOLS 1 AND 2 - 2014

Cite count: 10 (Web of Science)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 3.192 (2014)

Molecular image registration using mutual information and differential evolution optimization

  • Telenczuk, Bartosz
  • Ledesma-Carbayo, Marta J.
  • Velazquez-Muriel, Javier A.
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
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2006 3RD IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: MACRO TO NANO, VOLS 1-3 - 17/11/2006

Cite count: 4 (Web of Science) 11 (Scopus)

Iterative Reconstruction for PET scanners with continuous scintillators

  • Iriarte A.
  • Caffarena G.
  • Lopez-Fernandez M.
  • Garcia-Carmona R.
  • Otero A.
  • Sorzano C.
  • Marabini R.
... View more Collapse

2015 37TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC) - 4/08/2015

10.1109/embc.2015.7318842 View source

Cite count:
  • CiteScore: 1.5 (2020)
  • SJR: 0.263 (2015
  • SNIP: 0.653 (2015

Intelligent alarms for patient supervision

  • Otero A.
  • Félix P.
  • Palacios F.
  • Pérez-Gandía C.
  • Sorzano C.

2007 IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, CONFERENCE PROCEEDINGS BOOK - 1/12/2007

10.1109/wisp.2007.4447555 View source

Cite count: 1 (Web of Science) 7 (Scopus)

Image processing for Cellular tomography using soft X-rays

  • Sorzano, C. O. S.
  • Oton, J.
  • Cuenca, J.
  • Zaldivar-Perez, A.
  • Caffarena, G.
  • Sanchez-Jimenez, J.
  • Messaoudi, C.
  • Marco, S.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE
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2012 9TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI) - 2012

Cite count:

Grid computing in 3D-EM image processing using Xmipp

  • Scheres, SHW
  • Merino, AJ
  • Sorzano, COS
  • Carazo, JM
  • IEEE Comp Soc

18TH IEEE SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS, PROCEEDINGS - 10/11/2005

10.1109/cbms.2005.60 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.194 (2005
  • SNIP: 0.374 (2005

Flexible image registration for the identification of best fitted protein models in 3D-EM maps

  • Fernandez-de-Manuell, Laura
  • Ledesma-Carbayol, Maria J.
  • Atienza-Herrero, Julian
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
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2008 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1-4 - 10/05/2008

10.1109/isbi.2008.4541163 View source

Cite count:

Fast Global Image Alignment Algorithm for CryoEM through Vector Compression

  • Zarrabeitia O.L.
  • Ramirez-Aportela E.
  • Carazo J.M.
  • Sorzano C.O.S.

Proceedings - International Symposium on Biomedical Imaging - 1/1/2024

10.1109/isbi56570.2024.10635352

Cite count:

This author has no patents.

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
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22/11/2023

10.1101/2023.11.22.568042

  • ORCID

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression

  • Q. Marín M
  • Pérez P
  • Gómez CE
  • S. Sorzano CO
  • Esteban M
  • García-Arriaza J

05/2018

10.1101/330902

  • ORCID

Real-space heterogeneous reconstruction, refinement, and disentanglement of CryoEM conformational states with HetSIREN

  • David Herreros
  • Carlos Perez Mata
  • Chari Noddings
  • Deli Irene
  • James Michael Krieger
  • David Agard
  • Ming-Daw Tsai
  • Carlos Oscar S Sorzano
  • Jose Maria Carazo
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19/09/2024

10.1101/2024.09.16.613176

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
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5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v2

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
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10/2018

10.1101/433284

  • ORCID

Scopus: 36

Web of Science: 43

Scopus: 129

Web of Science: 174

Last data update: 11/22/24 7:57 AM
Next scheduled update: 11/23/24 3:00 AM