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Sánchez Sorzano, Carlos Oscar Author

A Guided Tour of Selected Image Processing and Analysis Methods for Fluorescence and Electron Microscopy

  • Kervrann, Charles
  • Sanchez Sorzano, Carlos Oscar
  • Acton, Scott T.
  • Olivo-Marin, Jean-Christophe
  • Unser, Michael

IEEE Journal of Selected Topics in Signal Processing - 1/02/2016

10.1109/jstsp.2015.2505402 View source

Cite count: 35 (Web of Science) 36 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.301 (2016)
  • CiteScore: 14.9 (2020)
  • SJR: 1.217 (2016
  • SNIP: 2.729 (2016
  • JCR 5-year Impact Factor: 5.294
  • JCR Categories: ENGINEERING, ELECTRICAL & ELECTRONIC
  • SJR Categories: Electrical and Electronic Engineering (Q1); Signal Processing (Q1)

Quantitative morphometrical characterization of human pronuclear zygotes

  • Beuchat, A.
  • Thevenaz, P.
  • Unser, M.
  • Ebner, T.
  • Senn, A.
  • Urner, F.
  • Germond, M.
  • Sorzano, C. O. S.
... View more Collapse

HUMAN REPRODUCTION - 1/09/2008

10.1093/humrep/den206 View source

Cite count: 34 (Web of Science) 36 (Scopus)
  • SJR Quartile: Q1
  • CiteScore: 10.2 (2020)
  • SJR: 1.784 (2008
  • SNIP: 1.595 (2008
  • SJR Categories: Obstetrics and Gynecology (Q1); Rehabilitation (Q1); Reproductive Medicine (Q1)

Electron microscopy structural insights into CPAP oligomeric behavior: A plausible assembly process of a supramolecular scaffold of the centrosome

  • Alvarez-Cabrera, Ana L.
  • Delgado, Sandra
  • Gil-Carton, David
  • Mortuza, Gulnahar B.
  • Montoya, Guillermo
  • Sorzano, Carlos O. S.
  • Tang, Tang K.
  • Carazo, Jose M.
... View more Collapse

Frontiers in Molecular Biosciences - 27/03/2017

10.3389/fmolb.2017.00017 View source

Cite count: 4 (Web of Science) 4 (Scopus)
  • JCR Quartile: Q2 (2017)
  • SJR Quartile: Q1
  • Category normalized Impact: 0.159 (2017)
  • SJR Categories: Biochemistry (Q1); Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Molecular Biology (Q2)

Heterologous Combination of VSV-GP and NYVAC Vectors Expressing HIV-1 Trimeric gp145 Env as Vaccination Strategy to Induce Balanced B and T Cell Immune Responses

  • Perdiguero B.
  • Gómez C.
  • García-Arriaza J.
  • Sánchez-Corzo C.
  • Sorzano C.
  • Wilmschen S.
  • von Laer D.
  • Asbach B.
  • Schmalzl C.
  • Peterhoff D.
  • Ding S.
  • Wagner R.
  • Kimpel J.
  • Levy Y.
  • Pantaleo G.
  • Esteban M.
... View more Collapse

Frontiers in Immunology - 18/12/2019

10.3389/fimmu.2019.02941

Cite count: 9 (Web of Science) 3 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.085 (2019)
  • JCR 5-year Impact Factor: 5.733
  • JCR Categories: IMMUNOLOGY
  • SJR Categories: Immunology (Q1); Immunology and Allergy (Q1)
Open Access

Monocytes Phenotype and Cytokine Production in Human Immunodeficiency Virus-1 Infected Patients Receiving a Modified Vaccinia Ankara-Based HIV-1 Vaccine: Relationship to CD300 Molecules Expression

  • Vitalle, Joana
  • Zenarruzabeitia, Olatz
  • Terren, Inigo
  • Plana, Montserrat
  • Guardo, Alberto C.
  • Leal, Lorna
  • Pena, Jose
  • Garcia, Felipe
  • Borrego, Francisco
  • RISVAC-03 Study Grp
... View more Collapse

Frontiers in Immunology - 21/07/2017

10.3389/fimmu.2017.00836 View source

Cite count: 9 (Web of Science) 6 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.511 (2017)
  • CiteScore: 8.1 (2020)
  • SJR: 2.803 (2017
  • SNIP: 1.521 (2017
  • JCR 5-year Impact Factor: 6.059
  • JCR Categories: IMMUNOLOGY
  • SJR Categories: Immunology (Q1); Immunology and Allergy (Q1)

The Envelope-Based Fusion Antigen GP120C14K Forming Hexamer-Like Structures Triggers T Cell and Neutralizing Antibody Responses Against HIV-1

  • Raman S.
  • Mejías-Pérez E.
  • Gomez C.
  • García-Arriaza J.
  • Perdiguero B.
  • Vijayan A.
  • Pérez-Ruiz M.
  • Cuervo A.
  • Santiago C.
  • Sorzano C.
  • Sánchez-Corzo C.
  • Moog C.
  • Burger J.
  • Schorcht A.
  • Sanders R.
  • Carrascosa J.
  • Esteban M.
... View more Collapse

Frontiers in Immunology - 4/12/2019

10.3389/fimmu.2019.02793

Cite count: 1 (Web of Science)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.085 (2019)
  • JCR 5-year Impact Factor: 5.733
  • JCR Categories: IMMUNOLOGY
  • SJR Categories: Immunology (Q1); Immunology and Allergy (Q1)

Potency and durability of T and B cell immune responses after homologous and heterologous vector delivery of a trimer-stabilized, membrane-displayed HIV-1 clade ConC Env protein

  • Perdiguero B.
  • Hauser A.
  • Gómez C.E.
  • Peterhoff D.
  • Sideris E.
  • Sorzano C.Ó.S.
  • Wilmschen S.
  • Schaber M.
  • Stengel L.
  • Asbach B.
  • Ding S.
  • Von Laer D.
  • Levy Y.
  • Pantaleo G.
  • Kimpel J.
  • Esteban M.
  • Wagner R.
... View more Collapse

Frontiers in Immunology - 1/1/2023

10.3389/fimmu.2023.1270908

Cite count:

Immunogenicity and efficacy of a novel multi-patch SARS-CoV-2/COVID-19 vaccine candidate

  • Perdiguero B.
  • Marcos-Villar L.
  • López-Bravo M.
  • Sánchez-Cordón P.J.
  • Zamora C.
  • Valverde J.R.
  • Sorzano C.Ó.S.
  • Sin L.
  • Álvarez E.
  • Ramos M.
  • Del Val M.
  • Esteban M.
  • Gómez C.E.
... View more Collapse

Frontiers in Immunology - 1/1/2023

10.3389/fimmu.2023.1160065

Cite count: 1 (Scopus)

An MVA-based vector expressing cell-free ISG15 increases IFN-I production and improves HIV-1-specific CD8 T cell immune responses

  • Falqui M.
  • Perdiguero B.
  • Coloma R.
  • Albert M.
  • Marcos-Villar L.
  • McGrail J.P.
  • Sorzano C.Ó.S.
  • Esteban M.
  • Gómez C.E.
  • Guerra S.
... View more Collapse

Frontiers in Cellular and Infection Microbiology - 1/1/2023

10.3389/fcimb.2023.1187193

Cite count: 2 (Scopus)

Image processing tools for the validation of CryoEM maps

  • C. O. S. Sorzano
  • J. L. Vilas
  • E. Ramírez-Aportela
  • J. Krieger
  • D. del Hoyo
  • D. Herreros
  • E. Fernandez-Giménez
  • D. Marchán
  • J. R. Macías
  • I. Sánchez
  • L. del Caño
  • Y. Fonseca-Reyna
  • P. Conesa
  • A. García-Mena
  • J. Burguet
  • J. García Condado
  • J. Méndez García
  • M. Martínez
  • A. Muñoz-Barrutia
  • R. Marabini
  • J. Vargas
  • J. M. Carazo
... View more Collapse

Faraday Discussions - 4/04/2022

10.1039/d2fd00059h

Cite count: 2 (Web of Science)
  • JCR Impact Factor: 3.4 (2022)
  • JCR 5-year Impact Factor: 3.4
  • JCR Categories: CHEMISTRY, PHYSICAL

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Cite count: 3 (Scopus)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... View more Collapse

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Cite count: 5 (Web of Science) 1 (Scopus)
  • JCR Quartile: Q2 (2021)
  • Category normalized Impact: 0.595 (2021)
  • CiteScore: 2.2 (2020)
  • SJR: 0.711 (2020
  • SNIP: 0.57 (2020
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 2.2 (2020)
  • SJR: 0.751 (2013
  • SNIP: 0.362 (2013
  • SJR Categories: Genetics (Q3); Molecular Biology (Q3)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

Methods in Cell Biology - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • JCR Quartile: Q2 (2012)
  • JCR Impact Factor: 1.444 (2012)
  • Category normalized Impact: 0.027 (2012)
  • CiteScore: 2.8 (2020)
  • SJR: 0.908 (2012
  • JCR 5-year Impact Factor: 1.932
  • JCR Categories: CELL BIOLOGY

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Cite count: 4 (Web of Science) 3 (Scopus)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 0.156 (2014)
  • CiteScore: 0.8 (2020)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... View more Collapse

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Cite count: 9 (Web of Science) 4 (Scopus)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 0.312 (2014)
  • CiteScore: 0.8 (2020)

Clustering of biomedical scientific papers

  • Bravo-Alcobendas D.
  • Sorzano C.

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009

10.1109/wisp.2009.5286530 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing

Effects of the downsampling scheme on three-dimensional electron microscopy of single particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

WISP 2009 - 6th IEEE International Symposium on Intelligent Signal Processing - Proceedings - 10/08/2009

10.1109/wisp.2009.5286563 View source

Cite count: 3 (Scopus)
  • SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing

Grid computing in 3D-EM image processing using Xmipp

  • Scheres, SHW
  • Merino, AJ
  • Sorzano, COS
  • Carazo, JM
  • IEEE Comp Soc

Proceedings - Ieee Symposium On Computer-based Medical Systems - 10/11/2005

10.1109/cbms.2005.60 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.194 (2005
  • SNIP: 0.374 (2005

Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows

  • Li M.
  • Xu G.
  • Sorzano C.
  • Melero R.
  • Bajaj C.

Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010

10.1109/bmei.2010.5639445

Cite count: 1 (Scopus)
  • SJR Categories: Biomedical Engineering; Health Informatics; Health Information Management

Elastic image registration with applications to proteomics

  • Sorzano, C. O. S.
  • Thevenaz, P.
  • Valdes, I.
  • Beloso, A.
  • Unser, M.
  • Cristobal, G
  • Javidi, B
  • Vallmitjana, S
... View more Collapse

INFORMATION OPTICS - 1/12/2006

10.1063/1.2361232 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 0.7 (2020)
  • SJR: 0.184 (2006
  • SNIP: 0.204 (2006

LocalDeblur: An automatic map sharpening by restauration of local resolution

  • Ramirez-Aportela, E.
  • Vilas, J. L.
  • Carazo, J. M.
  • Sanchez Sorzano, C. O.

European Biophysics Journal With Biophysics Letters - 07/2019

  • JCR Impact Factor: 2.094 (2019)
  • JCR 5-year Impact Factor: 1.888
  • JCR Categories: BIOPHYSICS
Open Access

Consistent and elastic registration of histological sections using vector-spline regularization

  • Arganda-Carreras, Ignacio
  • Sorzano, Carlos O. S.
  • Marabini, Roberto
  • Carazo, Jose Maria
  • Ortiz-de-Solorzano, Carlos
  • Kybic, Jan
  • Beichel, RR
... View more Collapse

COMPUTER VISION APPROACHES TO MEDICAL IMAGE ANALYSIS - 1/1/2006

10.1007/11889762_8 View source

Cite count: 262 (Web of Science) 203 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.317 (2006
  • SNIP: 0.679 (2006

Using Scipion for Stream Image Processing at CryoEM Facilities

  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Conesa, P.
  • Rancel, Y.
  • del Cano, L.
  • Arranz, R.
  • Chichon, F. J.
  • Martin-Benito, J.
  • Carroni, M.
  • Fleichman, S.
  • Lindahl, E.
  • Basham, M.
  • Clare, D. K.
  • Savage, K.
  • Siebert, C. A.
  • Ashton, A. W.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
... View more Collapse

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098380

  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

Improving 3D reconstructions of macromolecular conformations

  • Kazemi, M.
  • Sorzano, C. O. S.
  • Georges, A. Des
  • Carazo, J. M.
  • Vargas, J.

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098446

  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

A fuzzy constraint satisfaction approach to identify and characterize apnea episodes

  • Otero A.
  • Sorzano C.
  • Félix P.
  • Álvarez M.
  • Zamarrón C.

2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 - 1/1/2008

10.1109/icbbe.2008.835

Cite count: 2 (Scopus)
  • SJR Categories: Biomedical Engineering; Biotechnology

This author has no patents.

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
... View more Collapse

10/2018

10.1101/433284

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
... View more Collapse

5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v1

  • ORCID

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
... View more Collapse

22/11/2023

10.1101/2023.11.22.568042

  • ORCID
Open Access

ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M.
  • Sorzano C.O.S.
  • Carazo J.M.
  • Georges A.d.
  • Abrishami V.
  • Vargas J.

Progress In Biophysics & Molecular Biology - 1/09/2021

10.1016/j.pbiomolbio.2021.01.001

Cite count: 2 (Web of Science) 1 (Scopus)
  • JCR Impact Factor: 4.799 (2021)
  • CiteScore: 5.8 (2020)
  • SJR: 0.859 (2020
  • SNIP: 0.995 (2020
  • JCR 5-year Impact Factor: 3.907
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
Open Access

The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation

  • Tiziana Ginex
  • Clara Marco-Marín
  • Miłosz Wieczór
  • Carlos P. Mata
  • James Krieger
  • Maria Luisa López-Redondo
  • Clara Francés-Gómez
  • Paula Ruiz-Rodriguez
  • Roberto Melero
  • Carlos Óscar Sánchez-Sorzano
  • Marta Martínez
  • Nadine Gougeard
  • Alicia Forcada-Nadal
  • Sara Zamora-Caballero
  • Roberto Gozalbo-Rovira
  • Carla Sanz-Frasquet
  • Jeronimo Bravo
  • Vicente Rubio
  • Alberto Marina
  • Ron Geller
  • Iñaki Comas
  • Carmen Gil
  • Mireia Coscolla
  • Modesto Orozco
  • José Luis Llácer
  • José-Maria Carazo
... View more Collapse

PLoS Pathogens - 7/12/2021

10.1371/journal.ppat.1010631

Cite count: 8 (Web of Science)
  • JCR Impact Factor: 7.464 (2021)
  • CiteScore: 10.5 (2021)
  • SJR: 2.596 (2021
  • SNIP: 1.618 (2021
  • JCR 5-year Impact Factor: 7.913
  • JCR Categories: VIROLOGY

Scopus: 36

Web of Science: 42

Scopus: 129

Web of Science: 163

Last data update: 6/1/24 8:39 AM
Next scheduled update: 6/8/24 3:00 AM