Sánchez Sorzano, Carlos Oscar Autor

ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation

  • Jiménez de la Morena J.
  • Conesa P.
  • Fonseca Y.C.
  • de Isidro-Gómez F.P.
  • Herreros D.
  • Fernández-Giménez E.
  • Strelak D.
  • Moebel E.
  • Buchholz T.O.
  • Jug F.
  • Martinez-Sanchez A.
  • Harastani M.
  • Jonic S.
  • Conesa J.J.
  • Cuervo A.
  • Losana P.
  • Sánchez I.
  • Iceta M.
  • del Cano L.
  • Gragera M.
  • Melero R.
  • Sharov G.
  • Castaño-Díez D.
  • Koster A.
  • Piccirillo J.G.
  • Vilas J.L.
  • Otón J.
  • Marabini R.
  • Sorzano C.O.S.
  • Carazo J.M.
... Ver más Contraer

JOURNAL OF STRUCTURAL BIOLOGY - 1/9/2022

10.1016/j.jsb.2022.107872

Número de citas: 12 (Web of Science)

Scipion PKPD: an Open-Source Platform for Biopharmaceutics, Pharmacokinetics and Pharmacodynamics Data Analysis

  • Sorzano C.O.S.
  • Fonseca-Reyna Y.
  • de la Cruz-Moreno M.A.P.

Pharmaceutical Research - 23/07/2021

10.1007/s11095-021-03065-1

Número de citas:

Scipion Flexibility Hub: an integrative framework for advanced analysis of conformational heterogeneity in cryoEM

  • Herreros D.
  • Krieger J.M.
  • Fonseca Y.
  • Conesa P.
  • Harastani M.
  • Vuillemot R.
  • Hamitouche I.
  • Serrano Gutiérrez R.
  • Gragera M.
  • Melero R.
  • Jonic S.
  • Carazo J.M.
  • Sorzano C.O.S.
... Ver más Contraer

Acta crystallographica. Section D, Structural biology - 1/7/2023

10.1107/s2059798323004497

Número de citas: 3 (Web of Science) 2 (Scopus)

ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds

  • Cuenca-Alba J.
  • del Cano L.
  • Gómez Blanco J.
  • de la Rosa Trevín J.
  • Conesa Mingo P.
  • Marabini R.
  • Carlos C.
  • Carazo J.
... Ver más Contraer

Journal of Structural Biology - 1/10/2017

10.1016/j.jsb.2017.06.004

Número de citas: 4 (Web of Science) 6 (Scopus)

Scipion-Chem: An Open Platform for Virtual Drug Screening

  • Del Hoyo D.
  • Salinas M.
  • Lomas A.
  • Ulzurrun E.
  • Campillo N.E.
  • Sorzano C.O.

Journal of Chemical Information and Modeling - 1/1/2023

10.1021/acs.jcim.3c01085

Número de citas:

Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy

  • de la Rosa-Trevin, J. M.
  • Quintana, A.
  • del Cano, L.
  • Zaldivar, A.
  • Foche, I.
  • Gutierrez, J.
  • Gomez-Blanco, J.
  • Burguet-Castell, J.
  • Cuenca-Alba, J.
  • Abrishami, V.
  • Vargas, J.
  • Oton, J.
  • Sharov, G.
  • Vilas, J. L.
  • Navas, J.
  • Conesa, P.
  • Kazemi, M.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
... Ver más Contraer

JOURNAL OF STRUCTURAL BIOLOGY - 1/07/2016

10.1016/j.jsb.2016.04.010 Ver en origen

Número de citas: 342 (Web of Science) 235 (Scopus)
Open Access

Safety and vaccine-induced HIV-1 immune responses in healthy volunteers following a late MVA-B boost 4 years after the last immunization

  • Guardo, Alberto C.
  • Elena Gomez, Carmen
  • Diaz-Brito, Vicens
  • Pich, Judit
  • Albert Arnaiz, Joan
  • Perdiguero, Beatriz
  • Garcia-Arriaza, Juan
  • Gonzalez, Nuria
  • Sorzano, Carlos O. S.
  • Jimenez, Laura
  • Luis Jimenez, Jose
  • Angeles Munoz-Fernandez, Maria
  • Gatell, Jose M.
  • Alcam, Jose
  • Esteban, Mariano
  • Bernaldo de Quiros, Juan Carlos Lopez
  • Garcia, Felipe
  • Plana, Montserrat
  • RISVAC02boost Study
... Ver más Contraer

PLoS One - 24/10/2017

10.1371/journal.pone.0186602 Ver en origen

Número de citas: 16 (Web of Science) 10 (Scopus)

Safety and immunogenicity of a modified vaccinia Ankara-based HIV-1 vaccine (MVA-B) in HIV-1-infected patients alone or in combination with a drug to reactivate latent HIV-1

  • Mothe, Beatriz
  • Climent, Nuria
  • Plana, Montserrat
  • Rosas, Miriam
  • Luis Jimenez, Jose
  • Angeles Munoz-Fernandez, Maria
  • Puertas, Maria C.
  • Carrillo, Jorge
  • Gonzalez, Nuria
  • Leon, Agathe
  • Pich, Judit
  • Albert Arnaiz, Joan
  • Gatell, Jose M.
  • Clotet, Bonaventura
  • Blanco, Julia
  • Alcami, Jose
  • Martinez-Picado, Javier
  • Alvarez-Fernandez, Carmen
  • Sanchez-Palomino, Sonsoles
  • Guardo, Alberto C.
  • Pena, Jose
  • Benito, Jose M.
  • Rallon, Norma
  • Gomez, Carmen E.
  • Perdiguero, Beatriz
  • Garcia-Arriaza, Juan
  • Esteban, Mariano
  • Lopez Bernaldo de Quiros, Juan Carlos
  • Brander, Christian
  • Garcia, Felipe
  • RISVAC-03 Study Grp
... Ver más Contraer

Journal of Antimicrobial Chemotherapy - 12/06/2014

10.1093/jac/dkv046 Ver en origen

Número de citas: 50 (Web of Science) 42 (Scopus)

Role of clathrin in the inmune synapse formation

  • Calabia-Linares, C.
  • Alfonso-Perez, M. J.
  • Martin-Cofreces, N.
  • Perez-Martinez, M.
  • Aguado-Ballano, C.
  • Urbano-Olmos, F. R.
  • Sanchez-Sorzano, C. O.
  • Sanchez-Madrid, F.
  • Veiga, E.
... Ver más Contraer

MICROSCOPY AND MICROANALYSIS - 1/07/2009

10.1017/s1431927609099449 Ver en origen

Número de citas:
Open Access

Ribosome-associated vesicles: A dynamic subcompartment of the endoplasmic reticulum in secretory cells

  • Carter S.D.
  • Hampton C.M.
  • Langlois R.
  • Melero R.
  • Farino Z.J.
  • Calderon M.J.
  • Li W.
  • Wallace C.T.
  • Tran N.H.
  • Grassucci R.A.
  • Siegmund S.E.
  • Pemberton J.
  • Morgenstern T.J.
  • Eisenman L.
  • Aguilar J.I.
  • Greenberg N.L.
  • Levy E.S.
  • Yi E.
  • Mitchell W.G.
  • Rice W.J.
  • Wigge C.
  • Pilli J.
  • George E.W.
  • Aslanoglou D.
  • Courel M.
  • Freyberg R.J.
  • Javitch J.A.
  • Wills Z.P.
  • Area-Gomez E.
  • Shiva S.
  • Bartolini F.
  • Volchuk A.
  • Murray S.A.
  • Aridor M.
  • Fish K.N.
  • Walter P.
  • Balla T.
  • Fass D.
  • Wolf S.G.
  • Watkins S.C.
  • Carazo J.M.
  • Jensen G.J.
  • Frank J.
  • Freyberg Z.
... Ver más Contraer

Science Advances - 1/4/2020

10.1126/sciadv.aay9572

Número de citas: 30 (Web of Science) 11 (Scopus)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Número de citas: 3 (Scopus)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Número de citas: 4 (Web of Science) 3 (Scopus)
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Número de citas: 14 (Scopus)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

Methods in Cell Biology - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 Ver en origen

Número de citas: 2 (Web of Science) 2 (Scopus)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... Ver más Contraer

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Número de citas: 9 (Web of Science) 4 (Scopus)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Número de citas: 5 (Web of Science) 1 (Scopus)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Número de citas: 18 (Scopus)

Using Scipion for Stream Image Processing at CryoEM Facilities

  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Conesa, P.
  • Rancel, Y.
  • del Cano, L.
  • Arranz, R.
  • Chichon, F. J.
  • Martin-Benito, J.
  • Carroni, M.
  • Fleichman, S.
  • Lindahl, E.
  • Basham, M.
  • Clare, D. K.
  • Savage, K.
  • Siebert, C. A.
  • Ashton, A. W.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
... Ver más Contraer

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098380

Molecular image registration using mutual information and differential evolution optimization

  • Telenczuk, Bartosz
  • Ledesma-Carbayo, Marta J.
  • Velazquez-Muriel, Javier A.
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
... Ver más Contraer

2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano To Macro - Proceedings - 17/11/2006

Número de citas: 4 (Web of Science) 11 (Scopus)

LocalDeblur: An automatic map sharpening by restauration of local resolution

  • Ramirez-Aportela, E.
  • Vilas, J. L.
  • Carazo, J. M.
  • Sanchez Sorzano, C. O.

European Biophysics Journal With Biophysics Letters - 07/2019

Intelligent alarms for patient supervision

  • Otero A.
  • Félix P.
  • Palacios F.
  • Pérez-Gandía C.
  • Sorzano C.

2007 IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, CONFERENCE PROCEEDINGS BOOK - 1/12/2007

10.1109/wisp.2007.4447555 Ver en origen

Número de citas: 1 (Web of Science) 7 (Scopus)

Improving 3D reconstructions of macromolecular conformations

  • Kazemi, M.
  • Sorzano, C. O. S.
  • Georges, A. Des
  • Carazo, J. M.
  • Vargas, J.

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098446

Grid computing in 3D-EM image processing using Xmipp

  • Scheres, SHW
  • Merino, AJ
  • Sorzano, COS
  • Carazo, JM
  • IEEE Comp Soc

Proceedings - Ieee Symposium On Computer-based Medical Systems - 10/11/2005

10.1109/cbms.2005.60 Ver en origen

Número de citas: 1 (Web of Science) 3 (Scopus)

Flexible image registration for the identification of best fitted protein models in 3D-EM maps

  • Fernandez-de-Manuell, Laura
  • Ledesma-Carbayol, Maria J.
  • Atienza-Herrero, Julian
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
... Ver más Contraer

2008 5th Ieee International Symposium On Biomedical Imaging: From Nano To Macro, Proceedings, Isbi - 10/05/2008

10.1109/isbi.2008.4541163 Ver en origen

Número de citas:

Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows

  • Li M.
  • Xu G.
  • Sorzano C.
  • Melero R.
  • Bajaj C.

Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010

10.1109/bmei.2010.5639445

Número de citas: 1 (Scopus)

Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows

  • Li, Ming
  • Xu, Guoliang
  • Sorzano, Carlos O. S.
  • Melero, Roberto
  • Bajaj, Chandrajit
  • Yu, W
  • Zhang, M
  • Wang, L
  • Song, Y
... Ver más Contraer

2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010

Elastic image registration with applications to proteomics

  • Sorzano, C. O. S.
  • Thevenaz, P.
  • Valdes, I.
  • Beloso, A.
  • Unser, M.
  • Cristobal, G
  • Javidi, B
  • Vallmitjana, S
... Ver más Contraer

INFORMATION OPTICS - 1/12/2006

10.1063/1.2361232 Ver en origen

Número de citas: 1 (Web of Science) 3 (Scopus)

Este autor no tiene patentes.

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
... Ver más Contraer

22/11/2023

10.1101/2023.11.22.568042

  • ORCID
Open Access

The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation

  • Tiziana Ginex
  • Clara Marco-Marín
  • Miłosz Wieczór
  • Carlos P. Mata
  • James Krieger
  • Maria Luisa López-Redondo
  • Clara Francés-Gómez
  • Paula Ruiz-Rodriguez
  • Roberto Melero
  • Carlos Óscar Sánchez-Sorzano
  • Marta Martínez
  • Nadine Gougeard
  • Alicia Forcada-Nadal
  • Sara Zamora-Caballero
  • Roberto Gozalbo-Rovira
  • Carla Sanz-Frasquet
  • Jeronimo Bravo
  • Vicente Rubio
  • Alberto Marina
  • Ron Geller
  • Iñaki Comas
  • Carmen Gil
  • Mireia Coscolla
  • Modesto Orozco
  • José Luis Llácer
  • José-Maria Carazo
... Ver más Contraer

PLoS Pathogens - 7/12/2021

10.1371/journal.ppat.1010631

Número de citas: 8 (Web of Science)

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing

  • James Michael Krieger
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo

International Journal of Molecular Sciences - 10/08/2023

10.3390/ijms241814245

Número de citas: 2 (Web of Science) 2 (Scopus)

Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression

  • Q. Marín M
  • Pérez P
  • Gómez CE
  • S. Sorzano CO
  • Esteban M
  • García-Arriaza J

05/2018

10.1101/330902

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
... Ver más Contraer

5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v1

  • ORCID

Improvements on marker-free images alignment for electron tomography

  • C.O.S. Sorzano
  • F. de Isidro-Gómez
  • E. Fernández-Giménez
  • D. Herreros
  • S. Marco
  • J.M. Carazo
  • C. Messaoudi
... Ver más Contraer

Journal of Structural Biology: X - 24/05/2020

10.1101/2020.05.22.110445

Número de citas: 8 (Web of Science)

Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming

  • Blanca Soler Palacios
  • Ricardo Villares
  • Pilar Lucas
  • Jose Miguel Rodriguez Frade
  • Ana Cayuela
  • Jonathan Gabriel Piccirillo
  • David Delgado Gestoso
  • Cristina Risco
  • Fernando Corrales
  • Carlos Oscar S Sorzano
  • Nuria Martinez
  • Jose Javier Conesa
  • Francisco J. Iborra
  • Mario Mellado
... Ver más Contraer

Frontiers in Immunology - 22/08/2022

10.1101/2022.08.22.504729

Número de citas:

Scopus: 36

Web of Science: 42

Scopus: 129

Web of Science: 163

Última actualización de los datos: 4/05/24 8:37
Próxima recolección programada: 11/05/24 3:00