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Sánchez Sorzano, Carlos Oscar Author

Principal component analysis is limited to low-resolution analysis in cryoEM

  • Sorzano C.O.S.
  • Carazo J.M.

Acta Crystallographica Section D Structural Biology - 1/06/2021

10.1107/s2059798321002291

Cite count: 8 (Web of Science) 3 (Scopus)
  • JCR Impact Factor: 5.699 (2021)
  • JCR 5-year Impact Factor: 6.009
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY

Predicting outcomes after pediatric stem cell transplantation for hematological malignancies: a decision-tree-based model

  • Perez-Martinez, Antonio
  • Gomez Lopez, Alicia
  • Mozo, Yasmina
  • Rosich, Blanca
  • Bueno, David
  • Gonzalez, Berta
  • Escudero, Adela
  • Mirones, Isabel
  • Fernandez, Alba
  • Sastre, Ana
  • Oscar Sorzano, Carlos
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BONE MARROW TRANSPLANTATION - 09/2018

  • JCR Impact Factor: 4.674 (2018)
  • JCR 5-year Impact Factor: 4.617
  • JCR Categories: HEMATOLOGY

Predicting MHC I restricted T cell epitopes in mice with NAP-CNB, a novel online tool

  • Wert-Carvajal C.
  • Sánchez-García R.
  • Macías J.R.
  • Sanz-Pamplona R.
  • Pérez A.M.
  • Alemany R.
  • Veiga E.
  • Sorzano C.Ó.S.
  • Muñoz-Barrutia A.
... View more Collapse

Scientific Reports - 1/12/2021

10.1038/s41598-021-89927-5

Cite count: 2 (Web of Science) 1 (Scopus)
  • JCR Impact Factor: 4.997 (2021)
  • JCR 5-year Impact Factor: 5.516
  • JCR Categories: MULTIDISCIPLINARY SCIENCES

Potent HIV-1-specific CD8 T Cell Responses Induced in Mice After Immunization With a Heterologous DNA-TMEP Prime/MVA-B Vaccine Boost Regimen

  • Perdiguero, Beatriz
  • Raman, Suresh C.
  • Sanchez-Corzo, Cristina
  • Sorzano, Carlos Oscar S.
  • Ramon Valverde, Jose
  • Esteban, Mariano
  • Elena Gomez, Carmen
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AIDS RESEARCH AND HUMAN RETROVIRUSES - 10/2018

  • JCR Impact Factor: 1.805 (2018)
  • JCR 5-year Impact Factor: 1.692
  • JCR Categories: IMMUNOLOGY

Potent anti-hepatitis c virus (HCV) T cell immune responses induced in mice vaccinated with DNA-launched RNA replicons and modified vaccinia virus Ankara-HCV

  • Marín M.
  • Pérez P.
  • Ljungberg K.
  • Sorzano C.
  • Gómez C.
  • Liljeström P.
  • Esteban M.
  • García-Arriaza J.
... View more Collapse

JOURNAL OF VIROLOGY - 1/1/2019

10.1128/jvi.00055-19

Cite count: 13 (Web of Science) 6 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.501 (2019)
  • CiteScore: 8.9 (2020)
  • SJR: 2.406 (2019
  • SNIP: 1.096 (2019
  • JCR 5-year Impact Factor: 4.288
  • JCR Categories: VIROLOGY
  • SJR Categories: Immunology (Q1); Insect Science (Q1); Microbiology (Q1); Virology (Q1)

Potency and durability of T and B cell immune responses after homologous and heterologous vector delivery of a trimer-stabilized, membrane-displayed HIV-1 clade ConC Env protein

  • Perdiguero B.
  • Hauser A.
  • Gómez C.E.
  • Peterhoff D.
  • Sideris E.
  • Sorzano C.Ó.S.
  • Wilmschen S.
  • Schaber M.
  • Stengel L.
  • Asbach B.
  • Ding S.
  • Von Laer D.
  • Levy Y.
  • Pantaleo G.
  • Kimpel J.
  • Esteban M.
  • Wagner R.
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Frontiers in Immunology - 1/1/2023

10.3389/fimmu.2023.1270908

Cite count:
Open Access

PI3K p110δ Is Expressed by gp38-CD31+ and gp38+CD31+ Spleen Stromal Cells and Regulates Their CCL19, CCL21, and LTβR mRNA Levels

  • Zotes, Teresa M.
  • Spada, Roberto
  • Mulens, Vladimir
  • Perez-Yaguee, Sonia
  • Sorzano, Carlos O.
  • Okkenhaug, Klaus
  • Carrera, Ana C.
  • Barber, Domingo F.
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PLoS One - 29/08/2013

10.1371/journal.pone.0072960 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 3.534 (2013)
  • CiteScore: 5.3 (2020)
  • SJR: 1.772 (2013
  • SNIP: 1.166 (2013
  • JCR 5-year Impact Factor: 4.015
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • SJR Categories: Agricultural and Biological Sciences (miscellaneous) (Q1); Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Medicine (miscellaneous) (Q1)

Phan3D: Design of biological phantoms in 3D electron microscopy

  • Bilbao-Castro J.
  • Sorzano C.
  • García I.
  • Fernández J.

Bioinformatics - 22/11/2004

10.1093/bioinformatics/bth377

Cite count: 7 (Web of Science) 8 (Scopus)
  • JCR Quartile: Q1 (2004)
  • SJR Quartile: Q1
  • JCR Impact Factor: 5.742 (2022)
  • Category normalized Impact: 0.145 (2004)
  • CiteScore: 9.9 (2020)
  • SJR: 3.525 (2004
  • SNIP: 2.555 (2004
  • SJR Categories: Biochemistry (Q1); Computational Mathematics (Q1); Computational Theory and Mathematics (Q1); Computer Science Applications (Q1); Molecular Biology (Q1); Statistics and Probability (Q1)

Performance and Quality Comparison of Movie Alignment Software for Cryogenic Electron Microscopy

  • David Střelák
  • Daniel Marchán
  • José María Carazo
  • Carlos O. S. Sorzano

Micromachines - 26/09/2023

10.3390/mi14101835

Cite count:
Open Access

Pea PSII-LHCII supercomplexes form pairs by making connections across the stromal gap

  • Albanese, Pascal
  • Melero, Roberto
  • Engel, Benjamin D.
  • Grinzato, Alessandro
  • Berto, Paola
  • Manfredi, Marcello
  • Chiodoni, Angelica
  • Vargas, Javier
  • Sanchez Sorzano, Carlos Oscar
  • Marengo, Emilio
  • Saracco, Guido
  • Zanotti, Giuseppe
  • Carazo, Jose-Maria
  • Pagliano, Cristina
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Scientific Reports - 30/08/2017

10.1038/s41598-017-10700-8 View source

Cite count: 24 (Web of Science) 20 (Scopus)
  • JCR Quartile: Q2 (2017)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.122 (2022)
  • Category normalized Impact: 0.916 (2017)
  • CiteScore: 7.1 (2020)
  • SJR: 1.533 (2017
  • SNIP: 1.263 (2017
  • JCR 5-year Impact Factor: 4.609
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • SJR Categories: Multidisciplinary (Q1)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Cite count: 3 (Scopus)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Cite count: 4 (Web of Science) 3 (Scopus)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 0.156 (2014)
  • CiteScore: 0.8 (2020)
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 2.2 (2020)
  • SJR: 0.751 (2013
  • SNIP: 0.362 (2013
  • SJR Categories: Genetics (Q3); Molecular Biology (Q3)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

Methods in Cell Biology - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 View source

Cite count: 2 (Web of Science) 2 (Scopus)
  • JCR Quartile: Q2 (2012)
  • JCR Impact Factor: 1.444 (2012)
  • Category normalized Impact: 0.027 (2012)
  • CiteScore: 2.8 (2020)
  • SJR: 0.908 (2012
  • JCR 5-year Impact Factor: 1.932
  • JCR Categories: CELL BIOLOGY

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... View more Collapse

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Cite count: 9 (Web of Science) 4 (Scopus)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 0.312 (2014)
  • CiteScore: 0.8 (2020)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... View more Collapse

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Cite count: 5 (Web of Science) 1 (Scopus)
  • JCR Quartile: Q2 (2021)
  • Category normalized Impact: 0.595 (2021)
  • CiteScore: 2.2 (2020)
  • SJR: 0.711 (2020
  • SNIP: 0.57 (2020

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Using Scipion for Stream Image Processing at CryoEM Facilities

  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Conesa, P.
  • Rancel, Y.
  • del Cano, L.
  • Arranz, R.
  • Chichon, F. J.
  • Martin-Benito, J.
  • Carroni, M.
  • Fleichman, S.
  • Lindahl, E.
  • Basham, M.
  • Clare, D. K.
  • Savage, K.
  • Siebert, C. A.
  • Ashton, A. W.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
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Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098380

  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

Molecular image registration using mutual information and differential evolution optimization

  • Telenczuk, Bartosz
  • Ledesma-Carbayo, Marta J.
  • Velazquez-Muriel, Javier A.
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
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2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano To Macro - Proceedings - 17/11/2006

Cite count: 4 (Web of Science) 11 (Scopus)

LocalDeblur: An automatic map sharpening by restauration of local resolution

  • Ramirez-Aportela, E.
  • Vilas, J. L.
  • Carazo, J. M.
  • Sanchez Sorzano, C. O.

European Biophysics Journal With Biophysics Letters - 07/2019

  • JCR Impact Factor: 2.094 (2019)
  • JCR 5-year Impact Factor: 1.888
  • JCR Categories: BIOPHYSICS

Intelligent alarms for patient supervision

  • Otero A.
  • Félix P.
  • Palacios F.
  • Pérez-Gandía C.
  • Sorzano C.

2007 IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, CONFERENCE PROCEEDINGS BOOK - 1/12/2007

10.1109/wisp.2007.4447555 View source

Cite count: 1 (Web of Science) 7 (Scopus)

Improving 3D reconstructions of macromolecular conformations

  • Kazemi, M.
  • Sorzano, C. O. S.
  • Georges, A. Des
  • Carazo, J. M.
  • Vargas, J.

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098446

  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

Grid computing in 3D-EM image processing using Xmipp

  • Scheres, SHW
  • Merino, AJ
  • Sorzano, COS
  • Carazo, JM
  • IEEE Comp Soc

Proceedings - Ieee Symposium On Computer-based Medical Systems - 10/11/2005

10.1109/cbms.2005.60 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.194 (2005
  • SNIP: 0.374 (2005

Flexible image registration for the identification of best fitted protein models in 3D-EM maps

  • Fernandez-de-Manuell, Laura
  • Ledesma-Carbayol, Maria J.
  • Atienza-Herrero, Julian
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
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2008 5th Ieee International Symposium On Biomedical Imaging: From Nano To Macro, Proceedings, Isbi - 10/05/2008

10.1109/isbi.2008.4541163 View source

Cite count:

Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows

  • Li M.
  • Xu G.
  • Sorzano C.
  • Melero R.
  • Bajaj C.

Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010

10.1109/bmei.2010.5639445

Cite count: 1 (Scopus)
  • SJR Categories: Biomedical Engineering; Health Informatics; Health Information Management

Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows

  • Li, Ming
  • Xu, Guoliang
  • Sorzano, Carlos O. S.
  • Melero, Roberto
  • Bajaj, Chandrajit
  • Yu, W
  • Zhang, M
  • Wang, L
  • Song, Y
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2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010

Elastic image registration with applications to proteomics

  • Sorzano, C. O. S.
  • Thevenaz, P.
  • Valdes, I.
  • Beloso, A.
  • Unser, M.
  • Cristobal, G
  • Javidi, B
  • Vallmitjana, S
... View more Collapse

INFORMATION OPTICS - 1/12/2006

10.1063/1.2361232 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 0.7 (2020)
  • SJR: 0.184 (2006
  • SNIP: 0.204 (2006

This author has no patents.

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
... View more Collapse

22/11/2023

10.1101/2023.11.22.568042

  • ORCID
Open Access

The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation

  • Tiziana Ginex
  • Clara Marco-Marín
  • Miłosz Wieczór
  • Carlos P. Mata
  • James Krieger
  • Maria Luisa López-Redondo
  • Clara Francés-Gómez
  • Paula Ruiz-Rodriguez
  • Roberto Melero
  • Carlos Óscar Sánchez-Sorzano
  • Marta Martínez
  • Nadine Gougeard
  • Alicia Forcada-Nadal
  • Sara Zamora-Caballero
  • Roberto Gozalbo-Rovira
  • Carla Sanz-Frasquet
  • Jeronimo Bravo
  • Vicente Rubio
  • Alberto Marina
  • Ron Geller
  • Iñaki Comas
  • Carmen Gil
  • Mireia Coscolla
  • Modesto Orozco
  • José Luis Llácer
  • José-Maria Carazo
... View more Collapse

PLoS Pathogens - 7/12/2021

10.1371/journal.ppat.1010631

Cite count: 8 (Web of Science)
  • JCR Impact Factor: 7.464 (2021)
  • CiteScore: 10.5 (2021)
  • SJR: 2.596 (2021
  • SNIP: 1.618 (2021
  • JCR 5-year Impact Factor: 7.913
  • JCR Categories: VIROLOGY

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing

  • James Michael Krieger
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo

International Journal of Molecular Sciences - 10/08/2023

10.3390/ijms241814245

Cite count: 2 (Web of Science) 2 (Scopus)
  • CiteScore: 7.8 (2022)
  • SJR: 1.154 (2022
  • SNIP: 1.263 (2022

Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression

  • Q. Marín M
  • Pérez P
  • Gómez CE
  • S. Sorzano CO
  • Esteban M
  • García-Arriaza J

05/2018

10.1101/330902

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
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5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v1

  • ORCID

Improvements on marker-free images alignment for electron tomography

  • C.O.S. Sorzano
  • F. de Isidro-Gómez
  • E. Fernández-Giménez
  • D. Herreros
  • S. Marco
  • J.M. Carazo
  • C. Messaoudi
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Journal of Structural Biology: X - 24/05/2020

10.1101/2020.05.22.110445

Cite count: 8 (Web of Science)
  • SJR Quartile: Q4
  • JCR Impact Factor: 2.867 (2020)
  • JCR 5-year Impact Factor: 4.474
  • JCR Categories: CELL BIOLOGY
  • SJR Categories: Structural Biology (Q4)

Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming

  • Blanca Soler Palacios
  • Ricardo Villares
  • Pilar Lucas
  • Jose Miguel Rodriguez Frade
  • Ana Cayuela
  • Jonathan Gabriel Piccirillo
  • David Delgado Gestoso
  • Cristina Risco
  • Fernando Corrales
  • Carlos Oscar S Sorzano
  • Nuria Martinez
  • Jose Javier Conesa
  • Francisco J. Iborra
  • Mario Mellado
... View more Collapse

Frontiers in Immunology - 22/08/2022

10.1101/2022.08.22.504729

Cite count:
  • JCR Impact Factor: 7.3 (2022)
  • JCR 5-year Impact Factor: 8
  • JCR Categories: IMMUNOLOGY

Scopus: 36

Web of Science: 42

Scopus: 129

Web of Science: 163

Last data update: 5/18/24 8:47 AM
Next scheduled update: 5/25/24 3:00 AM