Sánchez Sorzano, Carlos Oscar Autor

Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy

  • Sorzano C.
  • Jiménez A.
  • Mota J.
  • Vilas J.
  • Maluenda D.
  • Martínez M.
  • Ramírez-Aportela E.
  • Majtner T.
  • Segura J.
  • Sánchez-García R.
  • Rancel Y.
  • Del Caño L.
  • Conesa P.
  • Melero R.
  • Jonic S.
  • Vargas J.
  • Cazals F.
  • Freyberg Z.
  • Krieger J.
  • Bahar I.
  • Marabini R.
  • Carazo J.
... Ver más Contraer

Acta Crystallographica Section F-Structural Biology Communications - 1/1/2019

10.1107/s2053230x18015108

Número de citas: 42 (Web of Science) 23 (Scopus)

Potent anti-hepatitis c virus (HCV) T cell immune responses induced in mice vaccinated with DNA-launched RNA replicons and modified vaccinia virus Ankara-HCV

  • Marín M.
  • Pérez P.
  • Ljungberg K.
  • Sorzano C.
  • Gómez C.
  • Liljeström P.
  • Esteban M.
  • García-Arriaza J.
... Ver más Contraer

JOURNAL OF VIROLOGY - 1/1/2019

10.1128/jvi.00055-19

Número de citas: 13 (Web of Science) 6 (Scopus)
Open Access

Large expert-curated database for benchmarking document similarity detection in biomedical literature search

  • Brown P.
  • Zhou Y.
  • Tan A.C.
  • El-Esawi M.A.
  • Liehr T.
  • Blanck O.
  • Gladue D.P.
  • Almeida G.M.F.
  • Cernava T.
  • Sorzano C.O.
  • Yeung A.W.K.
  • Engel M.S.
  • Chandrasekaran A.R.
  • Muth T.
  • Staege M.S.
  • Daulatabad S.V.
  • Widera D.
  • Zhang J.
  • Meule A.
  • Honjo K.
  • Pourret O.
  • Yin C.C.
  • Zhang Z.
  • Cascella M.
  • Flegel W.A.
  • Goodyear C.S.
  • van Raaij M.J.
  • Bukowy-Bieryllo Z.
  • Campana L.G.
  • Kurniawan N.A.
  • Lalaouna D.
  • Hüttner F.J.
  • Ammerman B.A.
  • Ehret F.
  • Cobine P.A.
  • Tan E.C.
  • Han H.
  • Xia W.
  • McCrum C.
  • Dings R.P.M.
  • Marinello F.
  • Nilsson H.
  • Nixon B.
  • Voskarides K.
  • Yang L.
  • Costa V.D.
  • Bengtsson-Palme J.
  • Bradshaw W.
  • Grimm D.G.
  • Kumar N.
  • Martis E.
  • Prieto D.
  • Sabnis S.C.
  • Amer S.E.D.R.
  • Liew A.W.C.
  • Perco P.
  • Rahimi F.
  • Riva G.
  • Zhang C.
  • Devkota H.P.
  • Ogami K.
  • Basharat Z.
  • Fierz W.
  • Siebers R.
  • Tan K.H.
  • Boehme K.A.
  • Brenneisen P.
  • Brown J.A.L.
  • Dalrymple B.P.
  • Harvey D.J.
  • Ng G.
  • Werten S.
  • Bleackley M.
  • Dai Z.
  • Dhariwal R.
  • Gelfer Y.
  • Hartmann M.D.
  • Miotla P.
  • Tamaian R.
  • Govender P.
  • Gurney-Champion O.J.
  • Kauppila J.H.
  • Zhang X.
  • Echeverría N.
  • Subhash S.
  • Sallmon H.
  • Tofani M.
  • Bae T.
  • Bosch O.
  • Cuív P.O.
  • Danchin A.
  • Diouf B.
  • Eerola T.
  • Evangelou E.
  • Filipp F.
  • Klump H.
  • Kurgan L.
  • Smith S.S.
  • Terrier O.
  • Tuttle N.
... Ver más Contraer

Database-The Journal of Biological Databases and Curation - 1/1/2019

10.1093/database/baz085

Número de citas: 14 (Web of Science) 2 (Scopus)

3DBIONOTES v3.0: Crossing molecular and structural biology data with genomic variations

  • Segura J.
  • Sanchez-Garcia R.
  • Sorzano C.
  • Carazo J.
  • Valencia A.

Bioinformatics - 15/09/2019

10.1093/bioinformatics/btz118

Número de citas: 9 (Web of Science) 3 (Scopus)

Validation of electron microscopy initial models via small angle X-ray scattering curves

  • Jiménez A.
  • Jonic S.
  • Majtner T.
  • Otón J.
  • Vilas J.
  • Maluenda D.
  • Mota J.
  • Ramírez-Aportela E.
  • Martínez M.
  • Rancel Y.
  • Segura J.
  • Sánchez-García R.
  • Melero R.
  • Del Cano L.
  • Conesa P.
  • Skjaerven L.
  • Marabini R.
  • Carazo J.
  • Sorzano C.
... Ver más Contraer

Bioinformatics - 15/07/2019

10.1093/bioinformatics/bty985

Número de citas: 6 (Web of Science) 1 (Scopus)
Open Access

A Novel MVA-Based HIV Vaccine Candidate (MVA-gp145-GPN) Co-Expressing Clade C Membrane-Bound Trimeric gp145 Env and Gag-Induced Virus-Like Particles (VLPs) Triggered Broad and Multifunctional HIV-1-Specific T Cell and Antibody Responses

  • Perdiguero, Beatriz
  • Sanchez-Corzo, Cristina
  • Sorzano, Carlos Oscar S.
  • Saiz, Lidia
  • Mediavilla, Pilar
  • Esteban, Mariano
  • Elena Gomez, Carmen
... Ver más Contraer

Viruses-Basel - 1/02/2019

10.3390/v11020160 Ver en origen

Número de citas: 10 (Web of Science) 6 (Scopus)

BIPSPI: a method for the prediction of partner-specific protein-protein interfaces

  • Sanchez-Garcia, Ruben
  • Sorzano, C. O. S.
  • Carazo, J. M.
  • Segura, Joan

BIOINFORMATICS - 1/02/2019

10.1093/bioinformatics/bty647 Ver en origen

Número de citas: 51 (Web of Science) 20 (Scopus)
Open Access

Burnout in health professionals according to their self-esteem, social support and empathy profile

  • Jurado M.
  • Pérez-Fuentes M.
  • Linares J.
  • Martín A.

Viruses-Basel - 20/4/2018

10.3389/fpsyg.2018.00424

Número de citas: 48 (Web of Science) 36 (Scopus)
Open Access

MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps

  • Vilas J.
  • Gómez-Blanco J.
  • Conesa P.
  • Melero R.
  • Miguel de la Rosa-Trevín J.
  • Otón J.
  • Cuenca J.
  • Marabini R.
  • Carazo J.
  • Vargas J.
  • Sorzano C.
... Ver más Contraer

Structure - 6/2/2018

10.1016/j.str.2017.12.018

Número de citas: 131 (Web of Science) 86 (Scopus)

Fast multiscale reconstruction for Cryo-EM

  • Donati, Laurene
  • Nilchian, Masih
  • Sorzano, Carlos Oscar S.
  • Unser, Michael

Journal of Structural Biology - 3/12/2018

10.1016/j.jsb.2018.09.008 Ver en origen

Número de citas: 6 (Web of Science) 7 (Scopus)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Número de citas: 5 (Web of Science) 1 (Scopus)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... Ver más Contraer

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Número de citas: 9 (Web of Science) 4 (Scopus)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Número de citas: 4 (Web of Science) 3 (Scopus)
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Número de citas: 14 (Scopus)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

Methods in Cell Biology - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 Ver en origen

Número de citas: 2 (Web of Science) 2 (Scopus)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Número de citas: 3 (Scopus)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Número de citas: 18 (Scopus)

LocalDeblur: An automatic map sharpening by restauration of local resolution

  • Ramirez-Aportela, E.
  • Vilas, J. L.
  • Carazo, J. M.
  • Sanchez Sorzano, C. O.

European Biophysics Journal With Biophysics Letters - 07/2019

Using Scipion for Stream Image Processing at CryoEM Facilities

  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Conesa, P.
  • Rancel, Y.
  • del Cano, L.
  • Arranz, R.
  • Chichon, F. J.
  • Martin-Benito, J.
  • Carroni, M.
  • Fleichman, S.
  • Lindahl, E.
  • Basham, M.
  • Clare, D. K.
  • Savage, K.
  • Siebert, C. A.
  • Ashton, A. W.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
... Ver más Contraer

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098380

Improving 3D reconstructions of macromolecular conformations

  • Kazemi, M.
  • Sorzano, C. O. S.
  • Georges, A. Des
  • Carazo, J. M.
  • Vargas, J.

Acta Crystallographica Section A - Foundation and Advances - 07/2018

10.1107/s0108767318098446

Elastic image registration to fully explore macromolecular dynamics by electron microscopy

  • Jin Q.
  • Sorzano C.
  • Callebaut I.
  • Tama F.
  • Jonic S.

2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/1/2014

10.1109/icip.2014.7025416 Ver en origen

Número de citas:

An image processing approach to the simulation of electron microscopy volumes of atomic structures

  • Sorzano, C.O.S.
  • Vargas, J.
  • Oton, J.
  • Abrishami, V.
  • De La Rosa-Trevin, J.M.
  • Del Riego, S.
  • Fernandez-Alderete, A.
  • Martinez-Rey, C.
  • Marabini, R.
  • Carazo, J.M.
... Ver más Contraer

2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/01/2014

10.1109/icip.2014.7025420 Ver en origen

Número de citas:

Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows

  • Li, Ming
  • Xu, Guoliang
  • Sorzano, Carlos O. S.
  • Melero, Roberto
  • Bajaj, Chandrajit
  • Yu, W
  • Zhang, M
  • Wang, L
  • Song, Y
... Ver más Contraer

2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010

Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows

  • Li M.
  • Xu G.
  • Sorzano C.
  • Melero R.
  • Bajaj C.

Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010

10.1109/bmei.2010.5639445

Número de citas: 1 (Scopus)

Clustering of biomedical scientific papers

  • Bravo-Alcobendas D.
  • Sorzano C.

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009

10.1109/wisp.2009.5286530 Ver en origen

Número de citas: 2 (Web of Science) 2 (Scopus)

Effects of the downsampling scheme on three-dimensional electron microscopy of single particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

WISP 2009 - 6th IEEE International Symposium on Intelligent Signal Processing - Proceedings - 10/08/2009

10.1109/wisp.2009.5286563 Ver en origen

Número de citas: 3 (Scopus)

A fuzzy constraint satisfaction approach to identify and characterize apnea episodes

  • Otero A.
  • Sorzano C.
  • Félix P.
  • Álvarez M.
  • Zamarrón C.

2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 - 1/1/2008

10.1109/icbbe.2008.835

Número de citas: 2 (Scopus)

Este autor no tiene patentes.

Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
... Ver más Contraer

22/11/2023

10.1101/2023.11.22.568042

  • ORCID

Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing

  • James Michael Krieger
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo

International Journal of Molecular Sciences - 10/08/2023

10.3390/ijms241814245

Número de citas: 2 (Web of Science) 2 (Scopus)

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)

  • Sorzano C.O.S.
  • Vilas J.L.
  • Ramírez-Aportela E.
  • Krieger J.
  • Del Hoyo D.
  • Herreros D.
  • Fernandez-Giménez E.
  • Marchán D.
  • De Isidro Gómez F.
  • Macías J.R.
  • Sánchez I.
  • Del Caño L.
  • Fonseca-Reyna Y.
  • Conesa P.
  • García-Mena A.
  • Burguet J.
  • García Condado J.
  • Méndez García J.
  • Martínez M.
  • Muñoz-Barrutia A.
  • Marabini R.
  • Vargas J.
  • Carazo J.M.
... Ver más Contraer

FARADAY DISCUSSIONS - 11/11/2022

10.1039/d2fd90074b

Número de citas:
Open Access

Erratum: The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation (PLoS Pathog (2022) 18:7 (e1010631) DOI: 10.1371/journal.ppat.1010631)

  • Ginex T.
  • Marco-Marín C.
  • Wieczór M.
  • Mata C.
  • Krieger J.
  • Ruiz-Rodriguez P.
  • López-Redondo M.L.
  • Francés-Gómez C.
  • Melero R.
  • Sánchez-Sorzano C.Ó.
  • Martínez M.
  • Gougeard N.
  • Forcada-Nadal A.
  • Zamora-Caballero S.
  • Gozalbo-Rovira R.
  • Sanz-Frasquet C.
  • Arranz R.
  • Bravo J.
  • Rubio V.
  • Marina A.
  • Geller R.
  • Comas I.
  • Gil C.
  • Coscolla M.
  • Orozco M.
  • Llácer J.L.
  • Carazo J.M.
... Ver más Contraer

PLoS Pathogens - 1/11/2022

10.1371/journal.ppat.1010995

Número de citas:

Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming

  • Blanca Soler Palacios
  • Ricardo Villares
  • Pilar Lucas
  • Jose Miguel Rodriguez Frade
  • Ana Cayuela
  • Jonathan Gabriel Piccirillo
  • David Delgado Gestoso
  • Cristina Risco
  • Fernando Corrales
  • Carlos Oscar S Sorzano
  • Nuria Martinez
  • Jose Javier Conesa
  • Francisco J. Iborra
  • Mario Mellado
... Ver más Contraer

Frontiers in Immunology - 22/08/2022

10.1101/2022.08.22.504729

Número de citas:

Automatic determination of the handedness of Single-Particle maps of macromolecules solved by CryoEM

  • J. Garcia Condado
  • A. Muñoz-Barrutia
  • C.O.S. Sorzano

JOURNAL OF STRUCTURAL BIOLOGY - 4/03/2022

10.1101/2022.03.01.482513

Número de citas:
Open Access

The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation

  • Tiziana Ginex
  • Clara Marco-Marín
  • Miłosz Wieczór
  • Carlos P. Mata
  • James Krieger
  • Maria Luisa López-Redondo
  • Clara Francés-Gómez
  • Paula Ruiz-Rodriguez
  • Roberto Melero
  • Carlos Óscar Sánchez-Sorzano
  • Marta Martínez
  • Nadine Gougeard
  • Alicia Forcada-Nadal
  • Sara Zamora-Caballero
  • Roberto Gozalbo-Rovira
  • Carla Sanz-Frasquet
  • Jeronimo Bravo
  • Vicente Rubio
  • Alberto Marina
  • Ron Geller
  • Iñaki Comas
  • Carmen Gil
  • Mireia Coscolla
  • Modesto Orozco
  • José Luis Llácer
  • José-Maria Carazo
... Ver más Contraer

PLoS Pathogens - 7/12/2021

10.1371/journal.ppat.1010631

Número de citas: 8 (Web of Science)
Open Access

ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M.
  • Sorzano C.O.S.
  • Carazo J.M.
  • Georges A.d.
  • Abrishami V.
  • Vargas J.

Progress In Biophysics & Molecular Biology - 1/09/2021

10.1016/j.pbiomolbio.2021.01.001

Número de citas: 2 (Web of Science) 1 (Scopus)

Cryo-EM Structure of a Tetrameric Photosystem I from Chroococcidiopsis TS-821, a Thermophilic, Non-heterocyst-forming Cyanobacteria

  • Dmitry Semchonok
  • Jyotirmoy Mondal
  • Connor Cooper
  • Katrina Schlum
  • Meng Li
  • Muhamed Amin
  • Carlos Sanchez Sorzano
  • Erney Ramírez-Aportela
  • Panagiotis Kastritis
  • Egbert Boekema
  • Albert Guskov
  • Barry Bruce
... Ver más Contraer

Plant Communications - 19/10/2020

10.21203/rs.3.rs-81702/v1

Número de citas: 8 (Web of Science) 2 (Scopus)

Scopus: 36

Web of Science: 42

Scopus: 129

Web of Science: 163

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