Sánchez Sorzano, Carlos Oscar Author
PDBe-KB: collaboratively defining the biological context of structural data
- Varadi, Mihaly
- Anyango, Stephen
- Armstrong, David
- Berrisford, John
- Choudhary, Preeti
- Deshpande, Mandar
- Nadzirin, Nurul
- Nair, Sreenath S.
- Pravda, Lukas
- Tanweer, Ahsan
- Al-Lazikani, Bissan
- Andreini, Claudia
- Barton, Geoffrey J.
- Bednar, David
- Berka, Karel
- Blundell, Tom
- Brock, Kelly P.
- Maria Carazo, Jose
- Damborsky, Jiri
- David, Alessia
- Dey, Sucharita
- Dunbrack, Roland
- Fernandez Recio, Juan
- Fraternali, Franca
- Gibson, Toby
- Helmer-Citterich, Manuela
- Hoksza, David
- Hopf, Thomas
- Jakubec, David
- Kannan, Natarajan
- Krivak, Radoslav
- Kumar, Manjeet
- Levy, Emmanuel D.
- London, Nir
- Macias, Jose Ramon
- Srivatsan, Madhusudhan M.
- Marks, Debora S.
- Martens, Lennart
- McGowan, Stuart A.
- McGreig, Jake E.
- Modi, Vivek
- Gonzalo Parra, R.
- Pepe, Gerardo
- Piovesan, Damiano
- Prilusky, Jaime
- Putignano, Valeria
- Radusky, Leandro G.
- Ramasamy, Pathmanaban
- Rausch, Atilio O.
- Reuter, Nathalie
- Rodriguez, Luis A.
- Rollins, Nathan J.
- Rosato, Antonio
- Serrano, Luis
- Singh, Gulzar
- Skoda, Petr
- Sorzano, Carlos Oscar S.
- Stourac, Jan
- Sulkowska, Joanna, I
- Svobodova, Radka
- Tichshenko, Natalia
- Tosatto, Silvio C. E.
- Vranken, Wim
- Wass, Mark N.
- Xue, Dandan
- Zaidman, Daniel
- Thornton, Janet
- Sternberg, Michael
- Orengo, Christine
- Velankar, Sameer
- PDBe-KB Consortium
NUCLEIC ACIDS RESEARCH - 10/11/2021
- JCR Impact Factor: 19.16 (2021)
- CiteScore: 28 (2021)
- SJR: 8.241 (2021
- SNIP: 5.19 (2021
- JCR 5-year Impact Factor: 17.21
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Scopus
- ORCID
- Web of Science
Particle quality assessment and sorting for automatic and semiautomatic particle-picking techniques
- Vargas, J.
- Abrishami, V.
- Marabini, R.
- de la Rosa-Trevín, J.M.
- Zaldivar, A.
- Carazo, J.M.
- Sorzano, C.O.S.
JOURNAL OF STRUCTURAL BIOLOGY - 1/09/2013
10.1016/j.jsb.2013.07.015 View source
- JCR Quartile: Q2 (2013)
- SJR Quartile: Q1
- JCR Impact Factor: 3.369 (2013)
- Category normalized Impact: 0.672 (2013)
- CiteScore: 5.5 (2020)
- SJR: 2.596 (2013
- SNIP: 1.256 (2013
- JCR 5-year Impact Factor: 3.407
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Particle alignment reliability in single particle electron cryomicroscopy: a general approach.
- Vargas, J.
- Oton, J.
- Marabini, R.
- Carazo, J. M.
- Sorzano, C. O. S.
Scientific Reports - 22/02/2016
- JCR Quartile: Q2 (2016)
- SJR Quartile: Q1
- JCR Impact Factor: 4.259 (2022)
- Category normalized Impact: 0.712 (2016)
- CiteScore: 7.1 (2020)
- SJR: 1.692 (2016
- SNIP: 1.368 (2016
- JCR 5-year Impact Factor: 4.847
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- SJR Categories: Multidisciplinary (Q1)
- Scopus
- ORCID
- Web of Science
Outlier detection for single particle analysis in Electron Microscopy
- Sorzano, C. O. S.
- Vargas, J.
- de la Rosa-Trevin, J. M.
- Zaldivar-Peraza, A.
- Oton, J.
- Abrishami, V.
- Foche, I.
- Marabini, R.
- Caffarena, G.
- Carazo, J. M.
- Ortuno, F
- Rojas, I
Proceedings Iwbbio 2014: International Work-Conference on Bioinformatics and Biomedical Engineering, Vols 1 and 2 - 2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 3.192 (2014)
- ORCID
- Web of Science
Optimized Hepatitis C Virus (HCV) E2 Glycoproteins and their Immunogenicity in Combination with MVA-HCV
- María Q. Marín
- Kwinten Sliepen
- Juan García-Arriaza
- Sylvie M. Koekkoek
- Patricia Pérez
- Carlos Óscar S. Sorzano
- Carmen E. Gómez
- Rogier W. Sanders
- Mariano Esteban
Vaccines - 5/08/2020
- JCR Impact Factor: 4.422 (2020)
- JCR 5-year Impact Factor: 5.513
- JCR Categories: IMMUNOLOGY
- Scopus
- ORCID
- Web of Science
Optimization problems in electron microscopy of single particles
- Sorzano, C. O. S.
- Marabini, R.
- Pascual-Montano, A.
- Scheres, S. H. W.
- Carazo, J. M.
Annals of Operations Research - 1/11/2006
10.1007/s10479-006-0078-8 View source
- JCR Quartile: Q2 (2006)
- SJR Quartile: Q2
- JCR Impact Factor: 0.589 (2022)
- Category normalized Impact: 0.264 (2006)
- CiteScore: 5.2 (2020)
- SJR: 0.61 (2006
- SNIP: 0.983 (2006
- SJR Categories: Decision Sciences (miscellaneous) (Q2); Management Science and Operations Research (Q2)
- Scopus
- ORCID
- Web of Science
On the development of three new tools for organizing and sharing information in three-dimensional electron microscopy
- Marabini, R.
- MacIas, J.R.
- Vargas, J.
- Quintana, A.
- Sorzano, C.O.S.
- Carazo, J.M.
Acta Crystallographica Section D: Biological Crystallography - 1/05/2013
10.1107/s0907444913007038 View source
- JCR Impact Factor: 7.232 (2013)
- CiteScore: 5.5 (2015)
- JCR 5-year Impact Factor: 9.416
- JCR Categories: CRYSTALLOGRAPHY
- Scopus
- ORCID
- Web of Science
On bias, variance, overfitting, gold standard and consensus in single-particle analysis by cryo-electron microscopy
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Martínez M.
- Ramírez-Aportela E.
- Krieger J.
- Melero R.
- Cuervo A.
- Conesa J.
- Filipovic J.
- Conesa P.
- Del Caño L.
- Fonseca Y.C.
- Jiménez-de la Morena J.
- Losana P.
- Sánchez-García R.
- Strelak D.
- Fernández-Giménez E.
- de Isidro-Gómez F.P.
- Herreros D.
- Vilas J.L.
- Marabini R.
- Carazo J.M.
Acta Crystallographica Section D-Structural Biology - 1/4/2022
- JCR Quartile: Q2 (2022)
- JCR Impact Factor: 2.2 (2022)
- Category normalized Impact: 2.434 (2022)
- JCR 5-year Impact Factor: 5.7
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Scopus
- ORCID
- Web of Science
NYVAC vector modified by C7L viral gene insertion improves T cell immune responses and effectiveness against leishmaniasis
- Sanchez-Sampedro, L.
- Mejias-Perez, E.
- Carlos Oscar, S. Sorzano
- Najera, J. L.
- Esteban, M.
Virus Research - 15/07/2016
10.1016/j.virusres.2016.03.007 View source
- SJR Quartile: Q2
- JCR Impact Factor: 2.628 (2016)
- CiteScore: 5.9 (2020)
- SJR: 1.208 (2016
- SNIP: 0.938 (2016
- JCR 5-year Impact Factor: 2.58
- JCR Categories: VIROLOGY
- SJR Categories: Cancer Research (Q2); Infectious Diseases (Q2); Virology (Q2)
- Scopus
- ORCID
- Web of Science
Normalizing projection images: A study of image normalizing procedures for single particle three-dimensional electron microscopy
- Sorzana, COS
- de la Fraga, LG
- Clackdoyle, R
- Carazo, JM
Ultramicroscopy - 1/11/2004
10.1016/j.ultramic.2004.04.004 View source
- JCR Quartile: Q2 (2004)
- SJR Quartile: Q1
- JCR Impact Factor: 2.215 (2022)
- Category normalized Impact: 0.958 (2004)
- CiteScore: 5 (2020)
- SJR: 1.482 (2004
- SNIP: 1.646 (2004
- SJR Categories: Atomic and Molecular Physics, and Optics (Q1); Electronic, Optical and Magnetic Materials (Q1); Instrumentation (Q1)
- Scopus
- ORCID
- Web of Science
Splines in Biomedical Image Processing
- Jonic S.
- Sorzano C.
Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011
- Scopus
- ORCID
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.156 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- SJR Quartile: Q3
- CiteScore: 2.2 (2020)
- SJR: 0.751 (2013
- SNIP: 0.362 (2013
- SJR Categories: Genetics (Q3); Molecular Biology (Q3)
- Scopus
- ORCID
Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes
- Devaux, Zaelle
- Sorzano, Carlos Oscar S.
- Jonic, Slavica
- Conn, PM
Methods in Cell Biology - 1/1/2012
10.1016/b978-0-12-405914-6.00016-0 View source
- JCR Quartile: Q2 (2012)
- JCR Impact Factor: 1.444 (2012)
- Category normalized Impact: 0.027 (2012)
- CiteScore: 2.8 (2020)
- SJR: 0.908 (2012
- JCR 5-year Impact Factor: 1.932
- JCR Categories: CELL BIOLOGY
- Scopus
- ORCID
- Web of Science
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.312 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- JCR Quartile: Q2 (2021)
- Category normalized Impact: 0.595 (2021)
- CiteScore: 2.2 (2020)
- SJR: 0.711 (2020
- SNIP: 0.57 (2020
- Scopus
- ORCID
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
Using Scipion for Stream Image Processing at CryoEM Facilities
- de la Rosa-Trevin, J. M.
- Gomez-Blanco, J.
- Conesa, P.
- Rancel, Y.
- del Cano, L.
- Arranz, R.
- Chichon, F. J.
- Martin-Benito, J.
- Carroni, M.
- Fleichman, S.
- Lindahl, E.
- Basham, M.
- Clare, D. K.
- Savage, K.
- Siebert, C. A.
- Ashton, A. W.
- Marabini, R.
- Sorzano, C. O. S.
- Carazo, J. M.
Acta Crystallographica Section A - Foundation and Advances - 07/2018
- JCR Impact Factor: 1.878 (2018)
- JCR 5-year Impact Factor: 4.647
- JCR Categories: CHEMISTRY, MULTIDISCIPLINARY
- ORCID
- Web of Science
Molecular image registration using mutual information and differential evolution optimization
- Telenczuk, Bartosz
- Ledesma-Carbayo, Marta J.
- Velazquez-Muriel, Javier A.
- Sorzano, Carlos O. S.
- Carazo, Jose-Maria
- Santos, Andres
- IEEE
2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano To Macro - Proceedings - 17/11/2006
- Scopus
- ORCID
- Web of Science
LocalDeblur: An automatic map sharpening by restauration of local resolution
- Ramirez-Aportela, E.
- Vilas, J. L.
- Carazo, J. M.
- Sanchez Sorzano, C. O.
European Biophysics Journal With Biophysics Letters - 07/2019
- JCR Impact Factor: 2.094 (2019)
- JCR 5-year Impact Factor: 1.888
- JCR Categories: BIOPHYSICS
- ORCID
- Web of Science
Intelligent alarms for patient supervision
- Otero A.
- Félix P.
- Palacios F.
- Pérez-Gandía C.
- Sorzano C.
2007 IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, CONFERENCE PROCEEDINGS BOOK - 1/12/2007
10.1109/wisp.2007.4447555 View source
- Scopus
- ORCID
- Web of Science
Improving 3D reconstructions of macromolecular conformations
- Kazemi, M.
- Sorzano, C. O. S.
- Georges, A. Des
- Carazo, J. M.
- Vargas, J.
Acta Crystallographica Section A - Foundation and Advances - 07/2018
- JCR Impact Factor: 1.878 (2018)
- JCR 5-year Impact Factor: 4.647
- JCR Categories: CHEMISTRY, MULTIDISCIPLINARY
- ORCID
- Web of Science
Grid computing in 3D-EM image processing using Xmipp
- Scheres, SHW
- Merino, AJ
- Sorzano, COS
- Carazo, JM
- IEEE Comp Soc
Proceedings - Ieee Symposium On Computer-based Medical Systems - 10/11/2005
10.1109/cbms.2005.60 View source
- CiteScore: 1.8 (2020)
- SJR: 0.194 (2005
- SNIP: 0.374 (2005
- Scopus
- ORCID
- Web of Science
Flexible image registration for the identification of best fitted protein models in 3D-EM maps
- Fernandez-de-Manuell, Laura
- Ledesma-Carbayol, Maria J.
- Atienza-Herrero, Julian
- Sorzano, Carlos O. S.
- Carazo, Jose-Maria
- Santos, Andres
- IEEE
2008 5th Ieee International Symposium On Biomedical Imaging: From Nano To Macro, Proceedings, Isbi - 10/05/2008
10.1109/isbi.2008.4541163 View source
- Scopus
- ORCID
- Web of Science
Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows
- Li M.
- Xu G.
- Sorzano C.
- Melero R.
- Bajaj C.
Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010
- SJR Categories: Biomedical Engineering; Health Informatics; Health Information Management
- Scopus
- ORCID
Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows
- Li, Ming
- Xu, Guoliang
- Sorzano, Carlos O. S.
- Melero, Roberto
- Bajaj, Chandrajit
- Yu, W
- Zhang, M
- Wang, L
- Song, Y
2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010
Elastic image registration with applications to proteomics
- Sorzano, C. O. S.
- Thevenaz, P.
- Valdes, I.
- Beloso, A.
- Unser, M.
- Cristobal, G
- Javidi, B
- Vallmitjana, S
INFORMATION OPTICS - 1/12/2006
- CiteScore: 0.7 (2020)
- SJR: 0.184 (2006
- SNIP: 0.204 (2006
- Scopus
- ORCID
- Web of Science
This author has no patents.
Unraveling the Power of NAP-CNB’s Machine Learning-enhanced Tumor Neoantigen Prediction
- Almudena Mendez-Perez
- Andres M Acosta-Moreno
- Carlos Wert-Carvajal
- Pilar Ballesteros-Cuartero
- Ruben Sanchez-Garcia
- Jose R Macias
- Rebeca Sanz-Pamplona
- Ramon Alemany
- Carlos Oscar S Sorzano
- Arrate Munoz-Barrutia
- Esteban Veiga
22/11/2023
- ORCID
The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation
- Tiziana Ginex
- Clara Marco-Marín
- Miłosz Wieczór
- Carlos P. Mata
- James Krieger
- Maria Luisa López-Redondo
- Clara Francés-Gómez
- Paula Ruiz-Rodriguez
- Roberto Melero
- Carlos Óscar Sánchez-Sorzano
- Marta Martínez
- Nadine Gougeard
- Alicia Forcada-Nadal
- Sara Zamora-Caballero
- Roberto Gozalbo-Rovira
- Carla Sanz-Frasquet
- Jeronimo Bravo
- Vicente Rubio
- Alberto Marina
- Ron Geller
- Iñaki Comas
- Carmen Gil
- Mireia Coscolla
- Modesto Orozco
- José Luis Llácer
- José-Maria Carazo
PLoS Pathogens - 7/12/2021
- JCR Impact Factor: 7.464 (2021)
- CiteScore: 10.5 (2021)
- SJR: 2.596 (2021
- SNIP: 1.618 (2021
- JCR 5-year Impact Factor: 7.913
- JCR Categories: VIROLOGY
- Scopus
- ORCID
- Web of Science
Statistical experiment design for animal research
- Carlos Oscar S. Sorzano
2/06/2023
- ORCID
Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing
- James Michael Krieger
- Carlos Oscar S. Sorzano
- Jose Maria Carazo
International Journal of Molecular Sciences - 10/08/2023
- CiteScore: 7.8 (2022)
- SJR: 1.154 (2022
- SNIP: 1.263 (2022
- Scopus
- ORCID
- Web of Science
Removal of the C6 vaccinia virus interferon-β inhibitor in the hepatitis C vaccine candidate MVA-HCV elicited in mice high immunogenicity in spite of reduced host gene expression
- Q. Marín M
- Pérez P
- Gómez CE
- S. Sorzano CO
- Esteban M
- García-Arriaza J
05/2018
- ORCID
Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis
- Vargas J
- Melero R
- Gomez-Blanco J
- Carazo J
- Sorzano COS
11/2016
- ORCID
NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice
- Carlos Wert-Carvajal
- Rubén Sánchez-García
- José R Macías
- Rebeca Sanz-Pamplona
- Almudena Méndez Pérez
- Ramon Alemany
- Esteban Veiga Chacón
- Carlos Óscar S. Sorzano
- Arrate Muñoz-Barrutia
5/10/2020
- ORCID
Multitarget Virtual Screening for Drug Repurposing in COVID19
- Sorzano co
- Crisman E
- Carazo JM
- leon r
15/07/2020
- ORCID
Improvements on marker-free images alignment for electron tomography
- C.O.S. Sorzano
- F. de Isidro-Gómez
- E. Fernández-Giménez
- D. Herreros
- S. Marco
- J.M. Carazo
- C. Messaoudi
Journal of Structural Biology: X - 24/05/2020
- SJR Quartile: Q4
- JCR Impact Factor: 2.867 (2020)
- JCR 5-year Impact Factor: 4.474
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q4)
- Scopus
- ORCID
- Web of Science
Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming
- Blanca Soler Palacios
- Ricardo Villares
- Pilar Lucas
- Jose Miguel Rodriguez Frade
- Ana Cayuela
- Jonathan Gabriel Piccirillo
- David Delgado Gestoso
- Cristina Risco
- Fernando Corrales
- Carlos Oscar S Sorzano
- Nuria Martinez
- Jose Javier Conesa
- Francisco J. Iborra
- Mario Mellado
Frontiers in Immunology - 22/08/2022
- JCR Impact Factor: 7.3 (2022)
- JCR 5-year Impact Factor: 8
- JCR Categories: IMMUNOLOGY
- Scopus
- ORCID
h index
Scopus: 36
Web of Science: 42
i10 index
Scopus: 129
Web of Science: 163
Author profiles
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Acronym P10-TIC-06002Since: March 15, 2011Until: March 15, 2014Funded by: JUNTAFunding / grant amount: 105,730.00 EURRole: Investigador
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Acronym 99109Since: June 2, 1999Until: June 2, 2000Funded by: Ministerio de Asuntos ExterioresFunding / grant amount: 19,232.39 EURRole: Investigador