Carazo García, José María Author
The Electron Microscopy eXchange (EMX) initiative.
- Marabini R
- Ludtke SJ
- Murray SC
- Chiu W
- de la Rosa-Trevín JM
- Patwardhan A
- Heymann JB
- Carazo JM
Journal of Structural Biology - 1/05/2016
10.1016/j.jsb.2016.02.008 View source
- SJR Quartile: Q1
- JCR Impact Factor: 2.767 (2016)
- CiteScore: 5.5 (2020)
- SJR: 2.732 (2016
- SNIP: 0.904 (2016
- JCR 5-year Impact Factor: 3.235
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
The first single particle analysis Map Challenge: A summary of the assessments
- Heymann J.
- Marabini R.
- Kazemi M.
- Sorzano C.
- Holmdahl M.
- Mendez J.
- Stagg S.
- Jonic S.
- Palovcak E.
- Armache J.
- Zhao J.
- Cheng Y.
- Pintilie G.
- Chiu W.
- Patwardhan A.
- Carazo J.
JOURNAL OF STRUCTURAL BIOLOGY - 1/11/2018
- SJR Quartile: Q1
- JCR Impact Factor: 3.754 (2018)
- CiteScore: 5.5 (2020)
- SJR: 5.254 (2018
- SNIP: 1.207 (2018
- JCR 5-year Impact Factor: 3.522
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
The Molecular Control of Calcitonin Receptor Signaling
- Dal Maso E.
- Glukhova A.
- Zhu Y.
- Garcia-Nafria J.
- Tate C.G.
- Atanasio S.
- Reynolds C.A.
- Ramírez-Aportela E.
- Carazo J.M.
- Hick C.A.
- Furness S.G.B.
- Hay D.L.
- Liang Y.L.
- Miller L.J.
- Christopoulos A.
- Wang M.W.
- Wootten D.
- Sexton P.M.
ACS Pharmacology and Translational Science - 8/2/2019
- Web of Science
- Scopus
- ORCID
The need for a shared database infrastructure: Combining X-ray crystallography and electron microscopy
- Kalko, SG
- Chagoyen, M
- Jimenez-Lozano, N
- Verdaguer, N
- Fita, I
- Carazo, JM
European Biophysics Journal With Biophysics Letters - 22/09/2000
- CiteScore: 4.1 (2020)
- SJR: 1.105 (2000
- SNIP: 0.798 (2000
- Scopus
- ORCID
- Web of Science
The potential of grid computing in three-dimensional electron microscopy
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
- Fernandez J.
Parallel Processing Letters - 1/06/2004
- SJR Quartile: Q3
- CiteScore: 1.2 (2020)
- SJR: 0.23 (2004
- SNIP: 0.664 (2004
- SJR Categories: Hardware and Architecture (Q3); Software (Q3); Theoretical Computer Science (Q4)
- Scopus
- ORCID
The RepA protein of plasmid RSF1010 is a replicative DNA helicase
- Scherzinger, E
- Ziegelin, G
- Barcena, M
- Carazo, JM
- Lurz, R
- Lanka, E
JOURNAL OF BIOLOGICAL CHEMISTRY - 28/11/1997
- JCR Impact Factor: 6.963 (2022)
- Category normalized Impact: 0.735 (1997)
- CiteScore: 7.7 (2020)
- ORCID
- Scopus
- Web of Science
The soft x-ray transform
- Klukowska, J.
- Herman, G.T.
- Otón, J.
- Marabini, R.
- Carazo, J.-M.
Inverse Problems - 1/12/2014
10.1088/0266-5611/30/12/125015 View source
- JCR Quartile: Q2 (2014)
- SJR Quartile: Q1
- JCR Impact Factor: 1.323 (2022)
- Category normalized Impact: 0.232 (2014)
- CiteScore: 3.7 (2020)
- SJR: 1.252 (2014
- SNIP: 1.397 (2014
- JCR 5-year Impact Factor: 1.95
- JCR Categories: PHYSICS, MATHEMATICAL
- SJR Categories: Applied Mathematics (Q1); Computer Science Applications (Q1); Mathematical Physics (Q1); Signal Processing (Q1); Theoretical Computer Science (Q1)
- ORCID
- Scopus
- Web of Science
The three-dimensional structure of a DNA translocating machine at 10 Å resolution
- Valpuesta, JM
- Fernandez, JJ
- Carazo, JM
- Carrascosa, JL
Structure - 15/03/1999
- SJR Quartile: Q1
- JCR Impact Factor: 4.862 (2022)
- Category normalized Impact: 0.809 (1999)
- CiteScore: 9 (2020)
- SJR: 6.698 (1999
- SNIP: 2.147 (1999
- SJR Categories: Molecular Biology (Q1); Structural Biology (Q1)
- Web of Science
- ORCID
- Scopus
Three-dimensional matching of macromolecular structures obtained from electron microscopy: an application to the 70S and 50S E. coli ribosomal particles.
- CARAZO, JM
- FRANK, J
Ultramicroscopy - 1/1/1988
- CiteScore: 5 (2020)
- Scopus
- ORCID
- Web of Science
Three-dimensional reconstruction from reduced sets of very noisy images acquired following a single-axis tilt schema: Application of a new three- dimensional reconstruction algorithm and objective comparison with weighted backprojection
- Marabini, R.
- Rietzel, E.
- Schroeder, R.
- Herman, G.T.
- Carazo, J.M.
Journal of Structural Biology - 1/12/1997
10.1006/jsbi.1997.3923 View source
- CiteScore: 5.5 (2020)
- ORCID
- Scopus
- Web of Science
A GA-optimized neural network for classification of biological particles from electron-microscopy images
- Merelo, JJ
- Prieto, A
- Moran, F
- Marabini, R
- Carazo, JM
- Mira, J
- MorenoDiaz, R
- Cabestany, J
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) - 1/1/1997
10.1007/bfb0032577 View source
- CiteScore: 1.8 (2020)
- ORCID
- Scopus
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
AN INTRODUCTION TO MAXIMUM-LIKELIHOOD METHODS IN CRYO-EM
- Sigworth, Fred J.
- Doerschuk, Peter C.
- Carazo, Jose-Maria
- Scheres, Sjors H. W.
- Jensen, GJ
Methods in Enzymology - 1/1/2010
- JCR Impact Factor: 1.626 (2010)
- CiteScore: 2.6 (2020)
- SJR: 1.408 (2010
- SNIP: 0.493 (2010
- JCR 5-year Impact Factor: 2.185
- JCR Categories: BIOCHEMICAL RESEARCH METHODS
- ORCID
- Scopus
- Web of Science
Exploring the conformational flexibility of molecular machines
- Sjors Scheres
- Herman, Gabor T.
- Jose Maria Carazo Garcia
Mathematical Methods In Biomedical Imaging and Intensity-modulated Radiation Therapy (imrt) - 2008
- ORCID
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- JCR Quartile: Q2 (2021)
- Category normalized Impact: 0.595 (2021)
- CiteScore: 2.2 (2020)
- SJR: 0.711 (2020
- SNIP: 0.57 (2020
- ORCID
- Scopus
- Web of Science
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.312 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Interchanging geometry information in electron microscopy single particle analysis: mathematical context for the development of a standard.
- Carlos Oscar S. Sorzano
- Roberto Marabini
- J. Vargas
- J. Otón
- J. Cuenca-Alba
- A. Quintana
- J.M. de la Rosa-Trevín
- Jose Maria Carazo Garcia
Computational Methods For Three-dimensional Microscopy Reconstruction - 2014
- ORCID
ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING
- MARABINI, R
- VAQUERIZO, C
- FERNANDEZ, JJJ
- CARAZO, JM
- LADJADJ, M
- ODESANYA, O
- FRANK, J
- Robb, RA
Visualization in Biomedical Computer 1994 - 9/09/1994
- CiteScore: 0.8 (2020)
- ORCID
- Scopus
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- SJR Quartile: Q3
- CiteScore: 2.2 (2020)
- SJR: 0.751 (2013
- SNIP: 0.362 (2013
- SJR Categories: Genetics (Q3); Molecular Biology (Q3)
- ORCID
- Scopus
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.156 (2014)
- CiteScore: 0.8 (2020)
- ORCID
- Scopus
- Web of Science
3-D ELECTRON MICROSCOPY AND INCOMPLETE ANGULAR COVERAGE: A RESTORATION SCHEME BASED ON PROJECTIONS ONTO CONVEX SETS.
- Carazo J.
ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings - 1/1/1988
- CiteScore: 4.6 (2020)
3-DIMENSIONAL STRUCTURE OF THE DNAB HELICASE OLIGOMER FROM ESCHERICHIA-COLI BY ELECTRON-MICROSCOPY AND IMAGE-PROCESSING
- Carmen San Martín
- STAMFORD, NPJ
- DAMMEROVA, N
- DIXON, NE
- Jose Maria Carazo Garcia
Electron Microscopy 1994, Vols 3a and 3b - 1994
- ORCID
3D reconstruction of macromolecules on multiprocessors
- Ujaldón M.
- Asenjo R.
- Zapata E.L.
- Cabaleiro J.C.
- Carazo J.M.
Proceedings of The 2nd Euromicro Workshop On Parallel and Distributed Processing, Pdp 1994 - 1/1/1994
- Scopus
- ORCID
A method for refining the geometry of images collected by the random conical tilt scheme based on common lines
- de la Fraga, LG
- Herman, GT
- Jose Maria Carazo Garcia
Electron Microscopy 1998, Vol 1 - 1998
- ORCID
Analysing cryoEM data quality in the post resolution revolution era: Validity criteria
- Jose Maria Carazo Garcia
European Biophysics Journal With Biophysics Letters - 07/2019
- ORCID
A new image translational alignment method with an application in electron crystallography
- Roca, R
- Danielsson, PE
- Jose Maria Carazo Garcia
- Jose-Jesus Fernandez
Electron Microscopy 1998, Vol 1 - 1998
- ORCID
An image processing approach to the simulation of electron microscopy volumes of atomic structures
- Sorzano, C.O.S.
- Vargas, J.
- Oton, J.
- Abrishami, V.
- De La Rosa-Trevin, J.M.
- Del Riego, S.
- Fernandez-Alderete, A.
- Martinez-Rey, C.
- Marabini, R.
- Carazo, J.M.
2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/01/2014
10.1109/icip.2014.7025420 View source
- SJR Categories: Computer Vision and Pattern Recognition
- ORCID
- Scopus
- Web of Science
A semantic mediation approach for problems in computational molecular biology
- Chagoyen M.
- Kurul M.
- De-Alarcon P.
- Santini S.
- Ludäscher B.
- Carazo J.
- Gupta A.
Proceedings of The 2003 Ieee Bioinformatics Conference, Csb 2003 - 1/1/2003
- SJR Categories: Transportation
- ORCID
- Scopus
AutoRes: Structure resolution determination through autocorrelation analysis
- J. Vargas
- Carlos Oscar S. Sorzano
- Jose Maria Carazo Garcia
3dem Gordon Research Conference 2015 - 2015
- ORCID
BioImage, the data base of volume images: Update on the first prototype
- Jose Maria Carazo Garcia
- Monica Chagoyen
- Lucini, JL
- Stelzer, E
- Lindek, S
- Fritsch, R
- Engel, A
- Heyman, JB
- Fita, I
- Susana G Kalko
- Henn, C
- Pittet, JJ
- McNeil, P
- Rodriquez-Tome, P
- Shotton, D
- Boudier, T
- Machtynger, J
Electron Microscopy 1998, Vol 1 - 1998
- ORCID
This author has no patents.
Accessing Information on the Conformational Flexibility of Molecular Machines
- Carazo, JM
Structure - 1/02/2004
- SJR Quartile: Q1
- CiteScore: 9 (2020)
- SJR: 4.47 (2004
- SNIP: 1.507 (2004
- SJR Categories: Molecular Biology (Q1); Structural Biology (Q1)
- Web of Science
- Scopus
- ORCID
Automatic local resolution-based sharpening of cryo-EM maps.
- Ramirez-Aportela E
- Vilas JL
- Melero R
- Conesa P
- Martinez M
- Maluenda D
- Mota J
- Jimenez A
- Vargas J
- Marabini R
- Carazo JM
- Sorzano COS
10/2018
- ORCID
A variant to the \'random approximation\' of the reference-free alignment algorithm
- Marco S.
- Chagoyen M.
- De La Fraga L.
- Carazo J.
- Carrascosa J.
Ultramicroscopy - 1/11/1996
- CiteScore: 5 (2020)
- Scopus
- ORCID
Biological structure determination by EM is well suited to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/06/2004
- JCR Quartile: Q2 (2004)
- SJR Quartile: Q2
- JCR Impact Factor: 0.854 (2022)
- CiteScore: 2.1 (2020)
- SJR: 0.556 (2004
- SNIP: 1.19 (2004
- SJR Categories: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- Web of Science
- ORCID
- Scopus
DeepEMhancer: a deep learning solution for cryo-EM volume post-processing
- Ruben Sanchez Garcia
- Josue Gomez-Blanco
- Ana Cuervo
- Jose Maria Carazo
- Carlos Oscar S Sorzano
- Javier Vargas
13/06/2020
- ORCID
Dynamic Kinetochore Size Regulation Promotes Microtubule Capture And Chromosome Biorientation In Mitosis
- Sacristan C
- Ahmad M
- Keller J
- Fermie J
- Groenewold V
- Tromer E
- Fish A
- Melero R
- Carazo JM
- Klumperman J
- Musacchio A
- Perrakis A
- Kops GJ
03/2018
- ORCID
ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions
- Kazemi M
- Sorzano COS
- Des Georges A
- Carazo JM
- Vargas J
08/2018
- ORCID
ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions
- Kazemi M.
- Sorzano C.O.S.
- Carazo J.M.
- Georges A.d.
- Abrishami V.
- Vargas J.
Progress In Biophysics & Molecular Biology - 1/09/2021
10.1016/j.pbiomolbio.2021.01.001
- JCR Impact Factor: 4.799 (2021)
- CiteScore: 5.8 (2020)
- SJR: 0.859 (2020
- SNIP: 0.995 (2020
- JCR 5-year Impact Factor: 3.907
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- ORCID
- Scopus
- Web of Science
Erratum: Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase (Proceedings of the National Academy of Sciences of the United States of America (2008) 23:51 (20191-20196))
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 7/4/2009
- SJR Quartile: Q1
- JCR Impact Factor: 9.432 (2009)
- CiteScore: 16.2 (2020)
- SJR: 7.025 (2009
- SNIP: 2.563 (2009
- JCR 5-year Impact Factor: 10.312
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- SJR Categories: Multidisciplinary (Q1)
Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)
- Sorzano C.O.S.
- Vilas J.L.
- Ramírez-Aportela E.
- Krieger J.
- Del Hoyo D.
- Herreros D.
- Fernandez-Giménez E.
- Marchán D.
- De Isidro Gómez F.
- Macías J.R.
- Sánchez I.
- Del Caño L.
- Fonseca-Reyna Y.
- Conesa P.
- García-Mena A.
- Burguet J.
- García Condado J.
- Méndez García J.
- Martínez M.
- Muñoz-Barrutia A.
- Marabini R.
- Vargas J.
- Carazo J.M.
FARADAY DISCUSSIONS - 11/11/2022
- JCR Impact Factor: 3.4 (2022)
- JCR 5-year Impact Factor: 3.4
- JCR Categories: CHEMISTRY, PHYSICAL
h index
Scopus: 52
Web of Science: 54
i10 index
Scopus: 178
Web of Science: 192
Author profiles
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Research projects at UAL
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Acronym 99109Since: June 2, 1999Until: June 2, 2000Funded by: Ministerio de Asuntos ExterioresFunding / grant amount: 19,232.39 EURRole: Investigador