RDF/XML JSON-LD N3/Turtle RDF/JSON

Carazo García, José María Author

The Molecular Control of Calcitonin Receptor Signaling

  • Dal Maso E.
  • Glukhova A.
  • Zhu Y.
  • Garcia-Nafria J.
  • Tate C.G.
  • Atanasio S.
  • Reynolds C.A.
  • Ramírez-Aportela E.
  • Carazo J.M.
  • Hick C.A.
  • Furness S.G.B.
  • Hay D.L.
  • Liang Y.L.
  • Miller L.J.
  • Christopoulos A.
  • Wang M.W.
  • Wootten D.
  • Sexton P.M.
... View more Collapse

ACS PHARMACOLOGY & TRANSLATIONAL SCIENCE - 8/2/2019

10.1021/acsptsci.8b00056

Cite count: 36 (Web of Science) 25 (Scopus)

FSC-Q: A method for quality analysis of cryoEM-derived models

  • Erney Ramírez-Aportela
  • David Maluenda Niubó
  • Fonseca, Yunior C.
  • Pablo Conesa Mingo
  • Roberto Marabini
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo Garcia
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 8/2021

Cite count:

Scipion for tomography: An expansion of Scipion software framework towards integration, reproducibility and validation in cryo-electron tomography

  • Federico P. de Isidro-Gómez
  • de la Morena, Jorge Jimenez
  • Pablo Conesa Mingo
  • David Herreros
  • Fernandez-Gimenez, Estrella
  • Fonseca, Yunior C.
  • Strelak, David
  • J.J. Conesa
  • Ana Cuervo
  • Patricia Losana
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo Garcia
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 8/2021

10.1107/s0108767321097610

Cite count:

Using Scipion for Stream Image Processing at CryoEM Facilities

  • de la Rosa-Trevin, J. M.
  • Gomez-Blanco, J.
  • Conesa, P.
  • Rancel, Y.
  • del Cano, L.
  • Arranz, R.
  • Chichon, F. J.
  • Martin-Benito, J.
  • Carroni, M.
  • Fleichman, S.
  • Lindahl, E.
  • Basham, M.
  • Clare, D. K.
  • Savage, K.
  • Siebert, C. A.
  • Ashton, A. W.
  • Marabini, R.
  • Sorzano, C. O. S.
  • Carazo, J. M.
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 7/2018

10.1107/s0108767318098380

Cite count:
  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

3DBionotes Covid-19 Edition

  • Macias JR
  • Sanchez-Garcia R
  • Conesa P
  • Ramirez-Aportela E
  • Martinez Gonzalez M
  • Wert-Carvajal C
  • Parra-Perez AM
  • Segura Mora J
  • Horrell S
  • Thorn A
  • Carazo JM
... View more Collapse

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 15/8/2021

10.1093/bioinformatics/btab397

Cite count:

Improving 3D reconstructions of macromolecular conformations

  • Kazemi, M.
  • Sorzano, C. O. S.
  • Georges, A. Des
  • Carazo, J. M.
  • Vargas, J.

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 7/2018

10.1107/s0108767318098446

Cite count:
  • JCR Impact Factor: 1.878 (2018)
  • JCR 5-year Impact Factor: 4.647
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

New Tools and Pipelines for Continuous Heterogeneity Analysis from Cryo-EM using Normal Modes and 3D Zernike Polynomials

  • Krieger, J.
  • Herreros, D.
  • Sorzano, C. O. S.
  • Carazo, J. M.

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES - 8/2022

10.1107/s2053273322096486

Cite count:
  • JCR Impact Factor: 1.8 (2022)
  • JCR 5-year Impact Factor: 2.2
  • JCR Categories: CHEMISTRY, MULTIDISCIPLINARY

On the development of three new tools for organizing and sharing information in three-dimensional electron microscopy

  • Marabini, R.
  • MacIas, J.R.
  • Vargas, J.
  • Quintana, A.
  • Sorzano, C.O.S.
  • Carazo, J.M.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY - 1/5/2013

10.1107/s0907444913007038 View source

Cite count: 5 (Web of Science) 5 (Scopus)
  • JCR Impact Factor: 7.232 (2013)
  • CiteScore: 5.5 (2015)
  • JCR 5-year Impact Factor: 9.416
  • JCR Categories: CRYSTALLOGRAPHY

Introducing robustness to maximum-likelihood refinement of electron-microsopy data

  • Scheres, Sjors H. W.
  • Carazo, Jose-Maria

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY - 10/7/2009

10.1107/s0907444909012049

Cite count: 7 (Web of Science) 6 (Scopus)
  • JCR Impact Factor: 2.257 (2009)
  • CiteScore: 5.5 (2015)
  • JCR 5-year Impact Factor: 2.013
  • JCR Categories: CRYSTALLOGRAPHY

Principal component analysis is limited to low-resolution analysis in cryoEM

  • Sorzano C.O.S.
  • Carazo J.M.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY - 1/6/2021

10.1107/s2059798321002291

Cite count: 8 (Web of Science) 3 (Scopus)
  • JCR Impact Factor: 5.699 (2021)
  • JCR 5-year Impact Factor: 6.009
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY

Interchanging geometry information in electron microscopy single particle analysis: mathematical context for the development of a standard.

  • Carlos Oscar S. Sorzano
  • Roberto Marabini
  • J. Vargas
  • J. Otón
  • J. Cuenca-Alba
  • A. Quintana
  • J.M. de la Rosa-Trevín
  • Jose Maria Carazo Garcia
... View more Collapse

Computational Methods For Three-dimensional Microscopy Reconstruction - 2014

  • ORCID

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods For Three-dimensional Visualization of Structures In The Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

AN INTRODUCTION TO MAXIMUM-LIKELIHOOD METHODS IN CRYO-EM

  • Sigworth, Fred J.
  • Doerschuk, Peter C.
  • Carazo, Jose-Maria
  • Scheres, Sjors H. W.
  • Jensen, GJ

METHODS IN ENZYMOLOGY, VOL 482: CRYO-EM, PART B: 3-D RECONSTRUCTION - 1/1/2010

10.1016/s0076-6879(10)82011-7

Cite count: 69 (Web of Science) 52 (Scopus)
  • JCR Impact Factor: 1.626 (2010)
  • CiteScore: 2.6 (2020)
  • SJR: 1.408 (2010
  • SNIP: 0.493 (2010
  • JCR 5-year Impact Factor: 2.185
  • JCR Categories: BIOCHEMICAL RESEARCH METHODS

Parallelization and comparison of 3D iterative reconstruction algorithms

  • Bilbao-Castro J.
  • Carazo J.
  • Fernández J.
  • García I.

12TH EUROMICRO CONFERENCE ON PARALLEL, DISTRIBUTED AND NETWORK-BASED PROCESSING, PROCEEDINGS - 12/7/2004

10.1109/empdp.2004.1271433

Cite count: 2 (Web of Science) 5 (Scopus)
  • SJR Categories: Engineering (miscellaneous)

Modeling shape and topology of 3D images of biological specimens

  • De-Alarcón P.
  • Pascual-Montano A.
  • Gupta A.
  • Carazo J.

16TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOL I, PROCEEDINGS - 1/12/2002

Cite count: 1 (Web of Science) 1 (Scopus)
  • CiteScore: 2.9 (2019)
  • SJR: 0.32 (2002
  • SNIP: 0.954 (2002
  • SJR Categories: Computer Vision and Pattern Recognition

Grid computing in 3D-EM image processing using Xmipp

  • Scheres, SHW
  • Merino, AJ
  • Sorzano, COS
  • Carazo, JM
  • IEEE Comp Soc

18TH IEEE SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS, PROCEEDINGS - 10/11/2005

10.1109/cbms.2005.60 View source

Cite count: 1 (Web of Science) 3 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.194 (2005
  • SNIP: 0.374 (2005

3D reconstruction of 2D crystals from projections in real space

  • Marabini, R
  • Herman, GT
  • Sorzano, COS
  • Carazo, JM
  • Fernandez, JJ
  • Matej, S
  • IEEE
... View more Collapse

2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS - 1/1/2002

10.1109/isbi.2002.1029351 View source

Cite count: 1 (Scopus)

Volumetric constraints in 3D tomography applied to electron microscopy

  • Marabini R.
  • Herman G.
  • Sorzano C.
  • Carazo J.

2002 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, PROCEEDINGS - 1/1/2002

10.1109/isbi.2002.1029339 View source

Cite count: 5 (Scopus)

Parallel iterative reconstruction methods for structure determination of biological specimens by electron microscopy

  • Bilbao-Castro J.
  • Carazo J.
  • García I.
  • Fernández J.

2003 INTERNATIONAL CONFERENCE ON IMAGE PROCESSING, VOL 1, PROCEEDINGS - 16/12/2003

Cite count: 6 (Web of Science) 12 (Scopus)
  • SJR Categories: Computer Vision and Pattern Recognition; Electrical and Electronic Engineering; Hardware and Architecture

Extending the incorporation of superfamily structural information in the process of flexible fitting in 3D-EM

  • Velázquez-Muriel J.
  • Carazo J.

2005 Ieee Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts - 1/12/2005

10.1109/csbw.2005.65

Cite count:
  • SJR Categories: Engineering (miscellaneous)

Two-way clustering of gene expression profiles by sparse matrix factorization

  • Pascual-Montano A.
  • Carmona-Sáez P.
  • Pascual-Marqui R.
  • Tirado F.
  • Carazo J.

2005 Ieee Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts - 1/12/2005

10.1109/csbw.2005.137

Cite count: 6 (Scopus)
  • SJR Categories: Engineering (miscellaneous)

Molecular image registration using mutual information and differential evolution optimization

  • Telenczuk, Bartosz
  • Ledesma-Carbayo, Marta J.
  • Velazquez-Muriel, Javier A.
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
... View more Collapse

2006 3RD IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: MACRO TO NANO, VOLS 1-3 - 17/11/2006

Cite count: 4 (Web of Science) 11 (Scopus)

Flexible image registration for the identification of best fitted protein models in 3D-EM maps

  • Fernandez-de-Manuell, Laura
  • Ledesma-Carbayol, Maria J.
  • Atienza-Herrero, Julian
  • Sorzano, Carlos O. S.
  • Carazo, Jose-Maria
  • Santos, Andres
  • IEEE
... View more Collapse

2008 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1-4 - 10/05/2008

10.1109/isbi.2008.4541163 View source

Cite count:

This author has no patents.

Open Access

Erratum: Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase (Proceedings of the National Academy of Sciences of the United States of America (2008) 23:51 (20191-20196))

  • Brewster A.
  • Wang G.
  • Yu X.
  • Greenleaf W.
  • Carazo J.
  • Tjajadi M.
  • Klein M.
  • Chen X.
... View more Collapse

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 7/4/2009

Cite count: 1 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 9.432 (2009)
  • CiteScore: 16.2 (2020)
  • SJR: 7.025 (2009
  • SNIP: 2.563 (2009
  • JCR 5-year Impact Factor: 10.312
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • SJR Categories: Multidisciplinary (Q1)

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
... View more Collapse

10/2018

10.1101/433284

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

Dynamic Kinetochore Size Regulation Promotes Microtubule Capture And Chromosome Biorientation In Mitosis

  • Sacristan C
  • Ahmad M
  • Keller J
  • Fermie J
  • Groenewold V
  • Tromer E
  • Fish A
  • Melero R
  • Carazo JM
  • Klumperman J
  • Musacchio A
  • Perrakis A
  • Kops GJ
... View more Collapse

03/2018

10.1101/279398

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v2

  • ORCID

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID

FSC-Q: A CryoEM map-to-atomic model quality validation based on the local Fourier Shell Correlation

  • Ramírez-Aportela E
  • Maluenda D
  • Fonseca YC
  • Conesa P
  • Marabini R
  • Heymann JB
  • Carazo JM
  • Sorzano COS
... View more Collapse

05/2020

10.1101/2020.05.12.069831

  • ORCID

Scopus: 52

Web of Science: 56

Scopus: 178

Web of Science: 211

Last data update: 11/23/24 5:42 AM
Next scheduled update: 11/30/24 3:00 AM