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Carazo García, José María Author

Open Access

Genetic diversity and recombination analysis of sweepoviruses from Brazil

  • Peschiera I.
  • Giuliani M.
  • Giusti F.
  • Melero R.
  • Paccagnini E.
  • Donnarumma D.
  • Pansegrau W.
  • Carazo J.
  • Sorzano C.
  • Scarselli M.
  • Masignani V.
  • Liljeroos L.
  • Ferlenghi I.
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VIROLOGY JOURNAL - 20/10/2012

10.1186/1743-422x-9-241

Cite count: 36 (Web of Science) 31 (Scopus)
  • JCR Quartile: Q2 (2012)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.165 (2022)
  • Category normalized Impact: 0.614 (2012)
  • CiteScore: 5.2 (2020)
  • SJR: 0.973 (2012
  • SNIP: 0.877 (2012
  • JCR Categories: BIOLOGY
  • SJR Categories: Agricultural and Biological Sciences (miscellaneous) (Q1); Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Medicine (miscellaneous) (Q1)
Open Access

STRUCTURE OF PHAGE-PHI-29 CONNECTOR PROTEIN ASSEMBLED INVIVO

  • CARRASCOSA, JL
  • CARAZO, JM
  • BANEZ, C
  • SANTISTEBAN, A

VIROLOGY - 1/03/1985

10.1016/0042-6822(85)90251-x

Cite count: 30 (Web of Science) 24 (Scopus)
  • CiteScore: 6.2 (2020)
Open Access

STRUCTURAL LOCALIZATION OF THE PROTEINS OF THE HEAD TO TAIL CONNECTING REGION OF BACTERIOPHAGE-PHI-29

  • CARRASCOSA, JL
  • CARAZO, JM
  • GARCIA, N

VIROLOGY - 15/01/1983

10.1016/0042-6822(83)90296-9

Cite count: 30 (Web of Science) 26 (Scopus)
  • CiteScore: 6.2 (2020)
Open Access

GENERAL MORPHOLOGY AND CAPSID FINE-STRUCTURE OF AFRICAN SWINE FEVER VIRUS-PARTICLES

  • CARRASCOSA, JL
  • CARAZO, JM
  • CARRASCOSA, AL
  • GARCIA, N
  • SANTISTEBAN, A
  • VINUELA, E

VIROLOGY - 15/1/1984

10.1016/0042-6822(84)90100-4

Cite count: 128 (Web of Science) 90 (Scopus)
  • CiteScore: 6.2 (2020)

3D reconstruction in electron microscopy using ART with smooth spherically symmetric volume elements (blobs)

  • Marabini, R.
  • Herman, G.T.
  • Carazo, J.M.

ULTRAMICROSCOPY - 1/4/1998

10.1016/s0304-3991(97)00127-7 View source

Cite count: 125 (Web of Science) 132 (Scopus)
  • CiteScore: 5 (2020)

DETECTION, CLASSIFICATION AND 3D RECONSTRUCTION OF BIOLOGICAL MACROMOLECULES ON HYPERCUBE COMPUTERS

  • CARAZO, JM
  • BENAVIDES, I
  • RIVERA, FF
  • ZAPATA, EL

ULTRAMICROSCOPY - 1/1992

10.1016/0304-3991(92)90232-9

Cite count: 7 (Web of Science)

A method for estimating the CTF in electron microscopy based on ARMA models and parameter adjustment

  • Velazquez-Muriel, JA
  • Sorzano, COS
  • Fernandez, JJ
  • Carazo, JM

ULTRAMICROSCOPY - 1/7/2003

10.1016/s0304-3991(02)00377-7 View source

Cite count: 46 (Web of Science) 44 (Scopus)
  • JCR Quartile: Q2 (2003)
  • SJR Quartile: Q1
  • JCR Impact Factor: 1.665 (2022)
  • Category normalized Impact: 1.715 (2003)
  • CiteScore: 5 (2020)
  • SJR: 1.365 (2003
  • SNIP: 1.725 (2003
  • SJR Categories: Atomic and Molecular Physics, and Optics (Q1); Electronic, Optical and Magnetic Materials (Q1); Instrumentation (Q1)

A fast iterative convolution weighting approach for gridding-based direct Fourier three-dimensional reconstruction with correction for the contrast transfer function

  • Abrishami, V.
  • Bilbao-Castro, J. R.
  • Vargas, J.
  • Marabini, R.
  • Carazo, J. M.
  • Sorzano, C. O. S.

ULTRAMICROSCOPY - 1/10/2015

10.1016/j.ultramic.2015.05.018 View source

Cite count: 23 (Web of Science) 17 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 2.874 (2015)
  • CiteScore: 5 (2020)
  • SJR: 2.066 (2015
  • SNIP: 1.304 (2015
  • JCR 5-year Impact Factor: 2.63
  • JCR Categories: MICROSCOPY
  • SJR Categories: Atomic and Molecular Physics, and Optics (Q1); Electronic, Optical and Magnetic Materials (Q1); Instrumentation (Q1)

Normalizing projection images: a study of image normalizing procedures for single particle three-dimensional electron microscopy

  • Sorzana, COS
  • de la Fraga, LG
  • Clackdoyle, R
  • Carazo, JM

ULTRAMICROSCOPY - 1/11/2004

10.1016/j.ultramic.2004.04.004 View source

Cite count: 25 (Web of Science) 24 (Scopus)
  • JCR Quartile: Q2 (2004)
  • SJR Quartile: Q1
  • JCR Impact Factor: 2.215 (2022)
  • Category normalized Impact: 0.958 (2004)
  • CiteScore: 5 (2020)
  • SJR: 1.482 (2004
  • SNIP: 1.646 (2004
  • SJR Categories: Atomic and Molecular Physics, and Optics (Q1); Electronic, Optical and Magnetic Materials (Q1); Instrumentation (Q1)

Analysis of structural variability within two-dimensional biological crystals by a combination of patch averaging techniques and self organizing maps

  • Fernandez, JJ
  • Carazo, JM

ULTRAMICROSCOPY - 1/9/1996

10.1016/s0304-3991(96)00063-0

Cite count: 13 (Web of Science) 13 (Scopus)
  • CiteScore: 5 (2020)

AN INTRODUCTION TO MAXIMUM-LIKELIHOOD METHODS IN CRYO-EM

  • Sigworth, Fred J.
  • Doerschuk, Peter C.
  • Carazo, Jose-Maria
  • Scheres, Sjors H. W.
  • Jensen, GJ

METHODS IN ENZYMOLOGY, VOL 482: CRYO-EM, PART B: 3-D RECONSTRUCTION - 1/1/2010

10.1016/s0076-6879(10)82011-7

Cite count: 69 (Web of Science) 52 (Scopus)
  • JCR Impact Factor: 1.626 (2010)
  • CiteScore: 2.6 (2020)
  • SJR: 1.408 (2010
  • SNIP: 0.493 (2010
  • JCR 5-year Impact Factor: 2.185
  • JCR Categories: BIOCHEMICAL RESEARCH METHODS

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods For Three-dimensional Visualization of Structures In The Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Interchanging geometry information in electron microscopy single particle analysis: mathematical context for the development of a standard.

  • Carlos Oscar S. Sorzano
  • Roberto Marabini
  • J. Vargas
  • J. Otón
  • J. Cuenca-Alba
  • A. Quintana
  • J.M. de la Rosa-Trevín
  • Jose Maria Carazo Garcia
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Computational Methods For Three-dimensional Microscopy Reconstruction - 2014

  • ORCID

THREE-DIMENSIONAL RECONSTRUCTION BY THE DIRECT FOURIER METHOD: AN IMAGE SIMULATION APPROACH TO THE CASE OF INCOMPLETE DATA.

  • Carazo J.M.
  • Carrascosa J.
  • Santisteban A.

1/12/1985

Cite count:

The role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the spike A222V mutation

  • Tiziana Ginex
  • Wieczór, M.
  • Krieger, J.
  • Orozco, M.
  • Jose Maria Carazo Garcia
  • Carmen Gil

Xx Congreso de la Sociedad Española de Química Terapéutica - 2022

  • ORCID

Caracterización estructural de la proteína mayoritaria de viroplasma P9-1 del virus del mal de Río Cuarto

  • Gabriela Llauger
  • Roberto Melero
  • Demian Monti
  • Gabriela Sycz
  • Cristina Huck-Iriart
  • María L. Cerutti
  • Sebastian Klinke
  • Rocío Arranz
  • Yann G.Sterckx
  • Vcitoria Alonso
  • Sofia Maite Arellano
  • Jose Maria Carazo Garcia
  • FernandoA.Goldbaum
  • Mariana del VAs
  • Lisandro H. Otero
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Xiii Congreso Argentino de Virología 2021 - 2021

  • ORCID

Effects of the Downsampling Scheme on Three-dimensional Electron Microscopy of Single Particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/08/2009

10.1109/wisp.2009.5286563 View source

Cite count: 3 (Scopus)
  • SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing
Open Access

ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING

  • MARABINI, R
  • VAQUERIZO, C
  • FERNANDEZ, JJJ
  • CARAZO, JM
  • LADJADJ, M
  • ODESANYA, O
  • FRANK, J
  • Robb, RA
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VISUALIZATION IN BIOMEDICAL COMPUTER 1994 - 9/09/1994

10.1117/12.185208 View source

Cite count: 1 (Web of Science) 4 (Scopus)
  • CiteScore: 0.8 (2020)

Minisymposium "New Trends in the Analysis of Functional Genomics Data"

  • Jose Maria Carazo Garcia
  • Pascual, Alberto

PROGRESS IN INDUSTRIAL MATHEMATICS AT ECMI 2006 - 2008

Cite count:

Functional classification of genes using non-negative independent component analysis

  • Monica Chagoyen
  • Fernandes, Hugo
  • Jose Maria Carazo Garcia
  • Pascual-Montano, Alberto

PROGRESS IN INDUSTRIAL MATHEMATICS AT ECMI 2006 - 2008

Cite count:

Biological sequence analysis on distributed-shared memory multiprocessors

  • Rodriguez A.
  • de la Fraga L.G.
  • Zapata E.L.
  • Carazo J.M.
  • Trelles O.

PROCEEDINGS OF THE SIXTH EUROMICRO WORKSHOP ON PARALLEL AND DISTRIBUTED PROCESSING - PDP '98 - 1/1/1998

10.1109/empdp.1998.647174

Cite count: 1 (Scopus)

3D reconstruction of macromolecules on multiprocessors

  • Ujaldón M.
  • Asenjo R.
  • Zapata E.L.
  • Cabaleiro J.C.
  • Carazo J.M.

Proceedings of The 2nd Euromicro Workshop On Parallel and Distributed Processing, Pdp 1994 - 1/1/1994

10.1109/empdp.1994.592499

Cite count:

A semantic mediation approach for problems in computational molecular biology

  • Chagoyen M.
  • Kurul M.
  • De-Alarcon P.
  • Santini S.
  • Ludäscher B.
  • Carazo J.
  • Gupta A.
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PROCEEDINGS OF THE 2003 IEEE BIOINFORMATICS CONFERENCE - 1/1/2003

10.1109/csb.2003.1227339

Cite count:
  • SJR Categories: Transportation

This author has no patents.

FSC-Q: A CryoEM map-to-atomic model quality validation based on the local Fourier Shell Correlation

  • Ramírez-Aportela E
  • Maluenda D
  • Fonseca YC
  • Conesa P
  • Marabini R
  • Heymann JB
  • Carazo JM
  • Sorzano COS
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05/2020

10.1101/2020.05.12.069831

  • ORCID

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
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10/2018

10.1101/433284

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

Dynamic Kinetochore Size Regulation Promotes Microtubule Capture And Chromosome Biorientation In Mitosis

  • Sacristan C
  • Ahmad M
  • Keller J
  • Fermie J
  • Groenewold V
  • Tromer E
  • Fish A
  • Melero R
  • Carazo JM
  • Klumperman J
  • Musacchio A
  • Perrakis A
  • Kops GJ
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03/2018

10.1101/279398

  • ORCID

Multitarget Virtual Screening for Drug Repurposing in COVID19

  • Sorzano co
  • Crisman E
  • Carazo JM
  • leon r

15/07/2020

10.26434/chemrxiv.12652997.v2

  • ORCID

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID
Open Access

Erratum: Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase (Proceedings of the National Academy of Sciences of the United States of America (2008) 23:51 (20191-20196))

  • Brewster A.
  • Wang G.
  • Yu X.
  • Greenleaf W.
  • Carazo J.
  • Tjajadi M.
  • Klein M.
  • Chen X.
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PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 7/4/2009

Cite count: 1 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 9.432 (2009)
  • CiteScore: 16.2 (2020)
  • SJR: 7.025 (2009
  • SNIP: 2.563 (2009
  • JCR 5-year Impact Factor: 10.312
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • SJR Categories: Multidisciplinary (Q1)

Scopus: 52

Web of Science: 56

Scopus: 178

Web of Science: 211

Last data update: 11/23/24 5:42 AM
Next scheduled update: 11/30/24 3:00 AM