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Carazo García, José María Autor

AN IMAGE-PROCESSING APPROACH TO DOTPLOTS - AN X-WINDOW-BASED PROGRAM FOR INTERACTIVE ANALYSIS OF DOTPLOTS DERIVED FROM SEQUENCE AND STRUCTURAL DATA

  • TRELLESSALAZAR, O
  • ZAPATA, EL
  • DOPAZO, J
  • COULSON, AFW
  • CARAZO, JM

COMPUTER APPLICATIONS IN THE BIOSCIENCES - 1/06/1995

10.1093/bioinformatics/11.3.301

Número de citas: 7 (Web of Science) 6 (Scopus)
  • CiteScore: 9,9 (2020)

Confidence limits for resolution estimation in image averaging by random subsampling

  • de la Fraga L.
  • Dopazo J.
  • Carazo J.

Ultramicroscopy - 1/10/1995

10.1016/0304-3991(95)00080-1

Número de citas: 12 (Scopus)
  • CiteScore: 5 (2020)

Proposal for a new distributed database of macromolecular and subcellular structures from different areas of microscopy

  • Marabini, R.
  • Vaquerizo, C.
  • Fernández, J.J.
  • Carazo, J.M.
  • Engel, A.
  • Frank, J.

Journal of Structural Biology - 1/01/1996

10.1006/jsbi.1996.0026 Ver en origen

Número de citas: 11 (Web of Science) 13 (Scopus)
  • CiteScore: 5,5 (2020)

Xmipp: An image processing package for electron microscopy

  • Marabini, R.
  • Masegosa, I.M.
  • San Martín, M.C.
  • Marco, S.
  • Fernández, J.J.
  • De La Fraga, L.G.
  • Vaquerizo, C.
  • Carazo, J.M.
... Ver más Contraer

JOURNAL OF STRUCTURAL BIOLOGY - 1/01/1996

10.1006/jsbi.1996.0036 Ver en origen

Número de citas: 169 (Web of Science) 169 (Scopus)
  • Factor Impacto JCR: 3,071 (2022)
  • Impacto Normalizado por Categoría: 3,149 (1996)
  • CiteScore: 5,5 (2020)

On a new computationally fast image invariant based on bispectral projections

  • Marabini, R
  • Carazo, JM

PATTERN RECOGNITION LETTERS - 1/08/1996

10.1016/0167-8655(96)00053-0 Ver en origen

Número de citas: 12 (Web of Science) 16 (Scopus)
  • CiteScore: 6,7 (2020)

Analysis of structural variability within two-dimensional biological crystals by a combination of patch averaging techniques and self organizing maps

  • Fernandez, JJ
  • Carazo, JM

Ultramicroscopy - 1/09/1996

10.1016/s0304-3991(96)00063-0

Número de citas: 13 (Web of Science) 13 (Scopus)
  • CiteScore: 5 (2020)

Implementation and experimental evaluation of the constrained ART algorithm on a multicomputer system

  • García I.
  • Roca J.
  • Sanjurjo J.
  • Carazo J.
  • Zapata E.

Signal Processing - 1/1/1996

10.1016/0165-1684(96)00032-1

Número de citas: 7 (Scopus)
  • CiteScore: 9,1 (2020)

Phylogenetic reconstruction using an unsupervised growing neural network that adopts the topology of a phylogenetic tree

  • Dopazo, J
  • Carazo, JM

JOURNAL OF MOLECULAR EVOLUTION - 26/02/1997

10.1007/pl00006139

Número de citas: 144 (Web of Science) 150 (Scopus)
  • CiteScore: 3,4 (2020)

Six molecules of SV40 large T antigen assemble in a propeller-shaped particle around a channel

  • SanMartin, MC
  • Gruss, C
  • Carazo, JM

Journal of Molecular Biology - 25/04/1997

10.1006/jmbi.1997.0952

Número de citas: 82 (Web of Science) 88 (Scopus)
  • CiteScore: 8,5 (2020)
Open Access

A new type of unsupervised growing neural network for biological sequence classification that adopts the topology of a phylogenetic tree

  • Dopazo J.
  • Wang H.
  • Carazo J.M.

Lecture Notes In Computer Science - 1/1/1997

10.1007/bfb0032553

Número de citas: 6 (Scopus)
  • CiteScore: 1,8 (2020)
Open Access

ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING

  • MARABINI, R
  • VAQUERIZO, C
  • FERNANDEZ, JJJ
  • CARAZO, JM
  • LADJADJ, M
  • ODESANYA, O
  • FRANK, J
  • Robb, RA
... Ver más Contraer

Visualization in Biomedical Computer 1994 - 9/09/1994

10.1117/12.185208 Ver en origen

Número de citas: 1 (Web of Science) 4 (Scopus)
  • CiteScore: 0,8 (2020)
Open Access

A GA-optimized neural network for classification of biological particles from electron-microscopy images

  • Merelo, JJ
  • Prieto, A
  • Moran, F
  • Marabini, R
  • Carazo, JM
  • Mira, J
  • MorenoDiaz, R
  • Cabestany, J
... Ver más Contraer

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) - 1/1/1997

10.1007/bfb0032577 Ver en origen

Número de citas: 1 (Web of Science) 1 (Scopus)
  • CiteScore: 1,8 (2020)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Número de citas: 18 (Scopus)

Exploring the conformational flexibility of molecular machines

  • Sjors Scheres
  • Herman, Gabor T.
  • Jose Maria Carazo Garcia

Mathematical Methods In Biomedical Imaging and Intensity-modulated Radiation Therapy (imrt) - 2008

  • ORCID

AN INTRODUCTION TO MAXIMUM-LIKELIHOOD METHODS IN CRYO-EM

  • Sigworth, Fred J.
  • Doerschuk, Peter C.
  • Carazo, Jose-Maria
  • Scheres, Sjors H. W.
  • Jensen, GJ

Methods in Enzymology - 1/1/2010

10.1016/s0076-6879(10)82011-7

Número de citas: 67 (Web of Science) 52 (Scopus)
  • Factor Impacto JCR: 1,626 (2010)
  • CiteScore: 2,6 (2020)
  • SJR: 1,408 (2010)
  • SNIP: 0,493 (2010)
  • Impacto JCR a 5 años: 2,185
  • Categorías JCR: BIOCHEMICAL RESEARCH METHODS
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Número de citas: 14 (Scopus)
  • Cuartil SJR: Q3
  • CiteScore: 2,2 (2020)
  • SJR: 0,751 (2013)
  • SNIP: 0,362 (2013)
  • Categorías SJR: Genetics (Q3); Molecular Biology (Q3)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... Ver más Contraer

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Número de citas: 9 (Web of Science) 4 (Scopus)
  • Cuartil JCR: Q2 (2014)
  • Impacto Normalizado por Categoría: 0,312 (2014)
  • CiteScore: 0,8 (2020)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Número de citas: 4 (Web of Science) 3 (Scopus)
  • Cuartil JCR: Q2 (2014)
  • Impacto Normalizado por Categoría: 0,156 (2014)
  • CiteScore: 0,8 (2020)

Interchanging geometry information in electron microscopy single particle analysis: mathematical context for the development of a standard.

  • Carlos Oscar S. Sorzano
  • Roberto Marabini
  • J. Vargas
  • J. Otón
  • J. Cuenca-Alba
  • A. Quintana
  • J.M. de la Rosa-Trevín
  • Jose Maria Carazo Garcia
... Ver más Contraer

Computational Methods For Three-dimensional Microscopy Reconstruction - 2014

  • ORCID
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Número de citas: 5 (Web of Science) 1 (Scopus)
  • Cuartil JCR: Q2 (2021)
  • Impacto Normalizado por Categoría: 0,595 (2021)
  • CiteScore: 2,2 (2020)
  • SJR: 0,711 (2020)
  • SNIP: 0,57 (2020)

THREE-DIMENSIONAL RECONSTRUCTION BY THE DIRECT FOURIER METHOD: AN IMAGE SIMULATION APPROACH TO THE CASE OF INCOMPLETE DATA.

  • Carazo J.M.
  • Carrascosa J.
  • Santisteban A.

1/12/1985

Número de citas:

3-D ELECTRON MICROSCOPY AND INCOMPLETE ANGULAR COVERAGE: A RESTORATION SCHEME BASED ON PROJECTIONS ONTO CONVEX SETS.

  • Carazo J.

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings - 1/1/1988

Número de citas:
  • CiteScore: 4,6 (2020)

Parallel architecture for real-time speech recognition in Spanish

  • Alexandres S.
  • Moran J.
  • Carazo J.
  • Santos A.

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings - 1/12/1990

Número de citas: 2 (Scopus)
  • CiteScore: 4,6 (2020)

Image reconstruction on hypercube computers

  • Zapata E.L.
  • Benavides I.
  • Rivera F.F.
  • Bruguera J.D.
  • Carazo J.M.

1/12/1990

Número de citas: 4 (Scopus)
Open Access

Mapping strategies for sequential sequence comparison algorithms on LAN-based message passing architectures

  • Trelles-Salazar O.
  • Zapata E.L.
  • Carazo J.M.

Lecture Notes In Computer Science - 1/1/1994

10.1007/bfb0020372

Número de citas: 6 (Scopus)
  • CiteScore: 1,8 (2020)

3D reconstruction of macromolecules on multiprocessors

  • Ujaldón M.
  • Asenjo R.
  • Zapata E.L.
  • Cabaleiro J.C.
  • Carazo J.M.

Proceedings of The 2nd Euromicro Workshop On Parallel and Distributed Processing, Pdp 1994 - 1/1/1994

10.1109/empdp.1994.592499

Número de citas:

3-DIMENSIONAL STRUCTURE OF THE DNAB HELICASE OLIGOMER FROM ESCHERICHIA-COLI BY ELECTRON-MICROSCOPY AND IMAGE-PROCESSING

  • Carmen San Martín
  • STAMFORD, NPJ
  • DAMMEROVA, N
  • DIXON, NE
  • Jose Maria Carazo Garcia

Electron Microscopy 1994, Vols 3a and 3b - 1994

  • ORCID

Electron tomography of biological specimens

  • Marabini R.
  • Carmen San Martin M.
  • Carazo J.

Studies in Health Technology and Informatics - 1/1/1997

10.3233/978-1-60750-874-8-53

Número de citas: 2 (Scopus)
  • CiteScore: 1,2 (2020)

Biological sequence analysis on distributed-shared memory multiprocessors

  • Rodriguez A.
  • de la Fraga L.G.
  • Zapata E.L.
  • Carazo J.M.
  • Trelles O.

Proceedings of The 6th Euromicro Workshop On Parallel and Distributed Processing, Pdp 1998 - 1/1/1998

10.1109/empdp.1998.647174

Número de citas: 1 (Scopus)

A method for refining the geometry of images collected by the random conical tilt scheme based on common lines

  • de la Fraga, LG
  • Herman, GT
  • Jose Maria Carazo Garcia

Electron Microscopy 1998, Vol 1 - 1998

  • ORCID

Este autor no tiene patentes.

A variant to the \'random approximation\' of the reference-free alignment algorithm

  • Marco S.
  • Chagoyen M.
  • De La Fraga L.
  • Carazo J.
  • Carrascosa J.

Ultramicroscopy - 1/11/1996

10.1016/s0304-3991(96)00083-6

Número de citas: 62 (Scopus)
  • CiteScore: 5 (2020)

New phylogenetic venues opened by a novel implementation of the DNAml algorithm

  • Trelles, O
  • Ceron, C
  • Wang, HC
  • Dopazo, J
  • Carazo, JM

Bioinformatics - 1/07/1998

10.1093/bioinformatics/14.6.544

Número de citas: 7 (Web of Science) 8 (Scopus)
  • CiteScore: 9,9 (2020)
Open Access

Accessing Information on the Conformational Flexibility of Molecular Machines

  • Carazo, JM

Structure - 1/02/2004

10.1016/j.str.2004.01.017

Número de citas: 3 (Web of Science) 4 (Scopus)
  • Cuartil SJR: Q1
  • CiteScore: 9 (2020)
  • SJR: 4,47 (2004)
  • SNIP: 1,507 (2004)
  • Categorías SJR: Molecular Biology (Q1); Structural Biology (Q1)

Biological structure determination by EM is well suited to grid computing

  • Fernandez J.
  • Bilbao-Castro J.
  • Marabini R.
  • Carazo J.
  • Garcia I.

New Generation Computing - 1/06/2004

10.1007/bf03040957

Número de citas:
  • Cuartil JCR: Q2 (2004)
  • Cuartil SJR: Q2
  • Factor Impacto JCR: 0,854 (2022)
  • CiteScore: 2,1 (2020)
  • SJR: 0,556 (2004)
  • SNIP: 1,19 (2004)
  • Categorías SJR: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)

On the suitability of biological structure determination by electron microscopy to grid computing

  • Fernandez J.
  • Bilbao-Castro J.
  • Marabini R.
  • Carazo J.
  • Garcia I.

New Generation Computing - 1/03/2005

10.1007/bf03037653

Número de citas: 7 (Web of Science) 6 (Scopus)
  • Cuartil JCR: Q3 (2005)
  • Cuartil SJR: Q2
  • Factor Impacto JCR: 0,5 (2022)
  • Impacto Normalizado por Categoría: 0,442 (2005)
  • CiteScore: 2,1 (2020)
  • SJR: 0,6 (2005)
  • SNIP: 1,719 (2005)
  • Categorías SJR: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
Open Access

Erratum: Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase (Proceedings of the National Academy of Sciences of the United States of America (2008) 23:51 (20191-20196))

  • Brewster A.
  • Wang G.
  • Yu X.
  • Greenleaf W.
  • Carazo J.
  • Tjajadi M.
  • Klein M.
  • Chen X.
... Ver más Contraer

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 7/4/2009

Número de citas: 1 (Scopus)
  • Cuartil SJR: Q1
  • Factor Impacto JCR: 9,432 (2009)
  • CiteScore: 16,2 (2020)
  • SJR: 7,025 (2009)
  • SNIP: 2,563 (2009)
  • Impacto JCR a 5 años: 10,312
  • Categorías JCR: MULTIDISCIPLINARY SCIENCES
  • Categorías SJR: Multidisciplinary (Q1)

Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis

  • Vargas J
  • Melero R
  • Gomez-Blanco J
  • Carazo J
  • Sorzano COS

11/2016

10.1101/088062

  • ORCID

Dynamic Kinetochore Size Regulation Promotes Microtubule Capture And Chromosome Biorientation In Mitosis

  • Sacristan C
  • Ahmad M
  • Keller J
  • Fermie J
  • Groenewold V
  • Tromer E
  • Fish A
  • Melero R
  • Carazo JM
  • Klumperman J
  • Musacchio A
  • Perrakis A
  • Kops GJ
... Ver más Contraer

03/2018

10.1101/279398

  • ORCID

iNEXT: a European facility network to stimulate translational structural biology

  • Rolf Boelens
  • Dmitri Svergun
  • Jan Ellenberg
  • Cusack, Stephen
  • Martin A. Walsh
  • Banci, Lucia
  • Harald Schwalbe
  • Perrakis, Anastassis
  • van Leeuwenhoek, Antoni
  • Vladimir Sklenar
  • Jose Maria Carazo Garcia
  • Hartmut Oschkinat
  • Thompson, Andrew
  • Thunnissen, Marjolein
  • Koster, Bram
  • Gordon Leonard
  • Brutscher, Bernhard
  • Stuart, David I.
  • Poul Nissen
  • Wacklin, Hanna
  • Perczel, Andras
  • Margarida Archer
  • Wierenga, Rik
  • Spyroulias, Georgios A.
  • Sussman, Joel
  • iNEXT Consortium
... Ver más Contraer

Febs Letters - 06/2018

10.1002/1873-3468.13062

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID

Scopus: 52

Web of Science: 54

Scopus: 178

Web of Science: 192

Última actualización de los datos: 27/04/24 8:34
Próxima recolección programada: 4/05/24 3:00