Marabini Ruiz, Roberto Author
Zero-loss P-contrast in EFTEM
- Rietzel, E
- Schorsch, P
- Muller, H
- Marabini, R
- Sorzano, C
- Carazo, JM
- Schimpf, U
- Leue, C
- Holmes, KC
- Schroder, RR
- Benavides, HAC
- Yacaman, MJ
Electron Microscopy 1998, Vol 4 - 1998
- ORCID
- Web of Science
XTEND: Extending the depth of field in cryo soft X-ray tomography
- Otón J.
- Pereiro E.
- Conesa J.
- Chichón F.
- Luque D.
- Rodríguez J.
- Pérez-Berná A.
- Sorzano C.
- Klukowska J.
- Herman G.
- Vargas J.
- Marabini R.
- Carrascosa J.
- Carazo J.
Scientific Reports - 4/04/2017
- JCR Quartile: Q1 (2017)
- SJR Quartile: Q1
- JCR Impact Factor: 4.122 (2022)
- Category normalized Impact: 0.886 (2017)
- CiteScore: 7.1 (2020)
- SJR: 1.533 (2017
- SNIP: 1.263 (2017
- JCR 5-year Impact Factor: 4.609
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- SJR Categories: Multidisciplinary (Q1)
- Scopus
- ORCID
- Web of Science
Xmipp: An image processing package for electron microscopy
- Marabini, R.
- Masegosa, I.M.
- San Martín, M.C.
- Marco, S.
- Fernández, J.J.
- De La Fraga, L.G.
- Vaquerizo, C.
- Carazo, J.M.
JOURNAL OF STRUCTURAL BIOLOGY - 1/01/1996
10.1006/jsbi.1996.0036 View source
- JCR Impact Factor: 3.071 (2022)
- Category normalized Impact: 3.149 (1996)
- CiteScore: 5.5 (2020)
- Scopus
- ORCID
- Web of Science
XMIPP: a new generation of an open-source image processing package for electron microscopy
- Sorzano, C.O.S.
- Marabini, R.
- Velázquez-Muriel, J.
- Bilbao-Castro, J.R.
- Scheres, S.H.W.
- Carazo, J.M.
- Pascual-Montano, A.
JOURNAL OF STRUCTURAL BIOLOGY - 1/11/2004
10.1016/j.jsb.2004.06.006 View source
- JCR Quartile: Q2 (2004)
- SJR Quartile: Q2
- JCR Impact Factor: 3.132 (2022)
- Category normalized Impact: 6.073 (2004)
- CiteScore: 5.5 (2020)
- SJR: 2.385 (2004
- SNIP: 1.286 (2004
- SJR Categories: Structural Biology (Q2)
- Scopus
- ORCID
- Web of Science
Xmipp 3.0: An improved software suite for image processing in electron microscopy
- de la Rosa-Trevin, J. M.
- Oton, J.
- Marabini, R.
- Zaldivar, A.
- Vargas, J.
- Carazo, J. M.
- Sorzano, C. O. S.
JOURNAL OF STRUCTURAL BIOLOGY - 1/11/2013
10.1016/j.jsb.2013.09.015 View source
- JCR Quartile: Q2 (2013)
- SJR Quartile: Q1
- JCR Impact Factor: 3.369 (2013)
- Category normalized Impact: 5.507 (2013)
- CiteScore: 5.5 (2020)
- SJR: 2.596 (2013
- SNIP: 1.256 (2013
- JCR 5-year Impact Factor: 3.407
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Volumetric restrictions in single particle 3DEM reconstruction
- Sorzano, C.O.S.
- Velázquez-Muriel, J.A.
- Marabini, R.
- Herman, G.T.
- Carazo, J.M.
Pattern Recognition - 1/02/2008
10.1016/j.patcog.2007.06.010 View source
- JCR Quartile: Q2 (2008)
- SJR Quartile: Q1
- JCR Impact Factor: 3.279 (2022)
- Category normalized Impact: 0.326 (2008)
- CiteScore: 15.7 (2020)
- SJR: 1.196 (2008
- SNIP: 2.213 (2008
- SJR Categories: Artificial Intelligence (Q1); Computer Vision and Pattern Recognition (Q1); Signal Processing (Q1); Software (Q1)
- Scopus
- ORCID
- Web of Science
Validation of electron microscopy initial models via small angle X-ray scattering curves
- Jiménez A.
- Jonic S.
- Majtner T.
- Otón J.
- Vilas J.
- Maluenda D.
- Mota J.
- Ramírez-Aportela E.
- Martínez M.
- Rancel Y.
- Segura J.
- Sánchez-García R.
- Melero R.
- Del Cano L.
- Conesa P.
- Skjaerven L.
- Marabini R.
- Carazo J.
- Sorzano C.
Bioinformatics - 15/07/2019
- SJR Quartile: Q1
- JCR Impact Factor: 5.61 (2019)
- CiteScore: 9.9 (2020)
- SJR: 3.567 (2019
- SNIP: 1.864 (2019
- JCR 5-year Impact Factor: 9.853
- JCR Categories: BIOTECHNOLOGY & APPLIED MICROBIOLOGY
- SJR Categories: Biochemistry (Q1); Computational Mathematics (Q1); Computational Theory and Mathematics (Q1); Computer Science Applications (Q1); Molecular Biology (Q1); Statistics and Probability (Q1)
- Scopus
- ORCID
- Web of Science
Using Scipion for stream image processing at Cryo-EM facilities
- Gómez-Blanco J.
- de la Rosa-Trevín J.
- Marabini R.
- del Cano L.
- Jiménez A.
- Martínez M.
- Melero R.
- Majtner T.
- Maluenda D.
- Mota J.
- Rancel Y.
- Ramírez-Aportela E.
- Vilas J.
- Carroni M.
- Fleischmann S.
- Lindahl E.
- Ashton A.
- Basham M.
- Clare D.
- Savage K.
- Siebert C.
- Sharov G.
- Sorzano C.
- Conesa P.
- Carazo J.
JOURNAL OF STRUCTURAL BIOLOGY - 1/12/2018
- SJR Quartile: Q1
- JCR Impact Factor: 3.754 (2018)
- CiteScore: 5.5 (2020)
- SJR: 5.254 (2018
- SNIP: 1.207 (2018
- JCR 5-year Impact Factor: 3.522
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Transfer function restoration in 3D electron microscopy via iterative data refinement
- Sorzano, COS
- Marabini, R
- Herman, GT
- Censor, Y
- Carazo, JM
Physics In Medicine and Biology - 21/02/2004
10.1088/0031-9155/49/4/003 View source
- JCR Quartile: Q2 (2004)
- SJR Quartile: Q1
- JCR Impact Factor: 2.368 (2022)
- Category normalized Impact: 0.34 (2004)
- CiteScore: 5.9 (2020)
- SJR: 1.047 (2004
- SNIP: 1.645 (2004
- SJR Categories: Radiological and Ultrasound Technology (Q1); Radiology, Nuclear Medicine and Imaging (Q1)
- Scopus
- ORCID
- Web of Science
Three-dimensional reconstruction methods in Single Particle Analysis from transmission electron microscopy data
- Carazo, J. M.
- Sorzano, C. O. S.
- Oton, J.
- Marabini, R.
- Vargas, J.
Archives of Biochemistry and Biophysics - 1/09/2015
10.1016/j.abb.2015.05.003 View source
- JCR Quartile: Q1 (2015)
- SJR Quartile: Q1
- JCR Impact Factor: 2.807 (2022)
- Category normalized Impact: 0.299 (2015)
- CiteScore: 5.8 (2020)
- SJR: 1.513 (2015
- SNIP: 1.008 (2015
- JCR 5-year Impact Factor: 3.073
- JCR Categories: BIOPHYSICS
- SJR Categories: Biochemistry (Q1); Biophysics (Q1); Molecular Biology (Q2)
- Scopus
- ORCID
- Web of Science
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.156 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods In Molecular Biology (clifton, N.j.) - 1/1/2013
- SJR Quartile: Q3
- CiteScore: 2.2 (2020)
- SJR: 0.751 (2013
- SNIP: 0.362 (2013
- SJR Categories: Genetics (Q3); Molecular Biology (Q3)
- Scopus
- ORCID
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.312 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- JCR Quartile: Q2 (2021)
- Category normalized Impact: 0.595 (2021)
- CiteScore: 2.2 (2020)
- SJR: 0.711 (2020
- SNIP: 0.57 (2020
- Scopus
- ORCID
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
Volumetric constraints in 3D tomography applied to electron microscopy
- Marabini R.
- Herman G.
- Sorzano C.
- Carazo J.
Proceedings - International Symposium on Biomedical Imaging - 1/1/2002
10.1109/isbi.2002.1029339 View source
- Scopus
- ORCID
- Web of Science
Towards a data-bank of three-dimensional macromolecular structures: A WWW-based prototype
- CARAZO, JM
- MARABINI, R
- VAQUERIZO, C
- FRANK, J
- Jouffrey, B
- Colliex, C
Electron Microscopy 1994, Vol 1 - 1994
- ORCID
- Web of Science
STUDY OF THE COLLARS EXTRACTED FROM T3 AND 029 VIRAL PARTICLES
- MARCO, S
- VALPUESTA, JM
- CARAZO, JM
- MARABINI, R
- FUJISAWA, H
- CARRASCOSA, JL
- Jouffrey, B
- Colliex, C
Electron Microscopy 1994, Vols 3a and 3b - 1994
- ORCID
- Web of Science
Pattern recognition and classification of images of biological macromolecules using neural networks
- MARABINI, R
- CARAZO, JM
- Jouffrey, B
- Colliex, C
Electron Microscopy 1994, Vol 1 - 1994
- ORCID
- Web of Science
ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING
- MARABINI, R
- VAQUERIZO, C
- FERNANDEZ, JJJ
- CARAZO, JM
- LADJADJ, M
- ODESANYA, O
- FRANK, J
- Robb, RA
Visualization In Biomedical Computer 1994 - 9/09/1994
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Iterative reconstruction for pet scanners with continuous scintillators
- Iriarte A.
- Caffarena G.
- Lopez-Fernandez M.
- Garcia-Carmona R.
- Otero A.
- Sorzano C.
- Marabini R.
Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS - 4/08/2015
10.1109/embc.2015.7318842 View source
- CiteScore: 1.5 (2020)
- SJR: 0.263 (2015
- SNIP: 0.653 (2015
- Scopus
- ORCID
- Web of Science
Image processing for Cellular tomography using soft X-rays
- Sorzano, C. O. S.
- Oton, J.
- Cuenca, J.
- Zaldivar-Perez, A.
- Caffarena, G.
- Sanchez-Jimenez, J.
- Messaoudi, C.
- Marco, S.
- Marabini, R.
- Carazo, J. M.
- IEEE
2012 9th Ieee International Symposium On Biomedical Imaging (isbi) - 2012
- ORCID
- Web of Science
Effects of uneven sampling in 3D reconstructions.
- Sorzano, COS
- Marabini, R
- Carazo, JM
- Rietzel, E
- Schroeder, R
- Herman, GT
- Boisset, N
- Benavides, HAC
- Yacaman, MJ
Electron Microscopy 1998, Vol 1 - 1998
- ORCID
- Web of Science
Effects of the downsampling scheme on three-dimensional electron microscopy of single particles
- Sorzano, C. O. S.
- Iriarte, A.
- Marabini, R.
- Carazo, J. M.
- IEEE
Wisp 2009 - 6th Ieee International Symposium On Intelligent Signal Processing - Proceedings - 10/08/2009
10.1109/wisp.2009.5286563 View source
- SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing
- Scopus
- ORCID
- Web of Science
Consistent and elastic registration of histological sections using vector-spline regularization
- Arganda-Carreras, Ignacio
- Sorzano, Carlos O. S.
- Marabini, Roberto
- Carazo, Jose Maria
- Ortiz-de-Solorzano, Carlos
- Kybic, Jan
- Beichel, RR
COMPUTER VISION APPROACHES TO MEDICAL IMAGE ANALYSIS - 1/1/2006
10.1007/11889762_8 View source
- CiteScore: 1.8 (2020)
- SJR: 0.317 (2006
- SNIP: 0.679 (2006
- Scopus
- ORCID
- Web of Science
This author has no patents.
Near Atomic Structure of an Atadenovirus Reveals a Conserved Capsid-Binding Motif and Intergenera Variations in Cementing Proteins
- Roberto Marabini
- Gabriela N. Condezo
- Josué Gómez-Blanco
- Carmen San Martín
Science Advances - 24/07/2020
- JCR Impact Factor: 14.143 (2020)
- JCR 5-year Impact Factor: 16.45
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- ORCID
Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)
- Sorzano C.O.S.
- Vilas J.L.
- Ramírez-Aportela E.
- Krieger J.
- Del Hoyo D.
- Herreros D.
- Fernandez-Giménez E.
- Marchán D.
- De Isidro Gómez F.
- Macías J.R.
- Sánchez I.
- Del Caño L.
- Fonseca-Reyna Y.
- Conesa P.
- García-Mena A.
- Burguet J.
- García Condado J.
- Méndez García J.
- Martínez M.
- Muñoz-Barrutia A.
- Marabini R.
- Vargas J.
- Carazo J.M.
FARADAY DISCUSSIONS - 11/11/2022
- JCR Impact Factor: 3.4 (2022)
- JCR 5-year Impact Factor: 3.4
- JCR Categories: CHEMISTRY, PHYSICAL
h index
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Web of Science: 27
i10 index
Scopus: 57
Web of Science: 69
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Acronym P10-TIC-06002Since: March 15, 2011Until: March 15, 2014Funded by: JUNTAFunding / grant amount: 105,730.00 EURRole: Investigador