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Marabini Ruiz, Roberto Author

Three-dimensional reconstruction from reduced sets of very noisy images acquired following a single-axis tilt schema: Application of a new three- dimensional reconstruction algorithm and objective comparison with weighted backprojection

  • Marabini, R.
  • Rietzel, E.
  • Schroeder, R.
  • Herman, G.T.
  • Carazo, J.M.

Journal of Structural Biology - 1/12/1997

10.1006/jsbi.1997.3923 View source

Cite count: 47 (Web of Science) 49 (Scopus)
  • CiteScore: 5.5 (2020)

Three-dimensional reconstruction by Chahine's method from electron microscopic projections corrupted by instrumental aberrations

  • Zubelli, J.P.
  • Marabini, R.
  • Sorzano, C.O.S.
  • Herman, G.T.

INVERSE PROBLEMS - 1/08/2003

10.1088/0266-5611/19/4/310 View source

Cite count: 13 (Web of Science) 13 (Scopus)
  • SJR Quartile: Q1
  • CiteScore: 3.7 (2020)
  • SJR: 0.796 (2003
  • SNIP: 1.378 (2003
  • SJR Categories: Theoretical Computer Science (Q1); Applied Mathematics (Q2); Computer Science Applications (Q2); Signal Processing (Q2); Mathematical Physics (Q3)

The soft x-ray transform

  • Klukowska, J.
  • Herman, G.T.
  • Otón, J.
  • Marabini, R.
  • Carazo, J.-M.

Inverse Problems - 1/12/2014

10.1088/0266-5611/30/12/125015 View source

Cite count: 3 (Web of Science) 4 (Scopus)
  • JCR Quartile: Q2 (2014)
  • SJR Quartile: Q1
  • JCR Impact Factor: 1.323 (2022)
  • Category normalized Impact: 0.232 (2014)
  • CiteScore: 3.7 (2020)
  • SJR: 1.252 (2014
  • SNIP: 1.397 (2014
  • JCR 5-year Impact Factor: 1.95
  • JCR Categories: PHYSICS, MATHEMATICAL
  • SJR Categories: Applied Mathematics (Q1); Computer Science Applications (Q1); Mathematical Physics (Q1); Signal Processing (Q1); Theoretical Computer Science (Q1)

The potential of grid computing in three-dimensional electron microscopy

  • Bilbao-Castro J.
  • Marabini R.
  • Carazo J.
  • Garcia I.
  • Fernandez J.

Parallel Processing Letters - 1/06/2004

10.1142/s0129626404001805

Cite count: 1 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 1.2 (2020)
  • SJR: 0.23 (2004
  • SNIP: 0.664 (2004
  • SJR Categories: Hardware and Architecture (Q3); Software (Q3); Theoretical Computer Science (Q4)

The first single particle analysis Map Challenge: A summary of the assessments

  • Heymann J.
  • Marabini R.
  • Kazemi M.
  • Sorzano C.
  • Holmdahl M.
  • Mendez J.
  • Stagg S.
  • Jonic S.
  • Palovcak E.
  • Armache J.
  • Zhao J.
  • Cheng Y.
  • Pintilie G.
  • Chiu W.
  • Patwardhan A.
  • Carazo J.
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JOURNAL OF STRUCTURAL BIOLOGY - 1/11/2018

10.1016/j.jsb.2018.08.010

Cite count: 14 (Web of Science) 9 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 3.754 (2018)
  • CiteScore: 5.5 (2020)
  • SJR: 5.254 (2018
  • SNIP: 1.207 (2018
  • JCR 5-year Impact Factor: 3.522
  • JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
  • SJR Categories: Structural Biology (Q1)

The Electron Microscopy eXchange (EMX) initiative

  • Marabini R
  • Ludtke SJ
  • Murray SC
  • Chiu W
  • de la Rosa-Trevín JM
  • Patwardhan A
  • Heymann JB
  • Carazo JM
... View more Collapse

Journal of Structural Biology - 1/05/2016

10.1016/j.jsb.2016.02.008 View source

Cite count: 8 (Web of Science) 9 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 2.767 (2016)
  • CiteScore: 5.5 (2020)
  • SJR: 2.732 (2016
  • SNIP: 0.904 (2016
  • JCR 5-year Impact Factor: 3.235
  • JCR Categories: CELL BIOLOGY
  • SJR Categories: Structural Biology (Q1)

The effect of overabundant projection directions on 3D reconstruction algorithms

  • Sorzano, COS
  • Marabini, R
  • Boisset, N
  • Rietzel, E
  • Schroder, R
  • Herman, GT
  • Carazo, JM
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Journal of Structural Biology - 1/02/2001

10.1006/jsbi.2001.4338 View source

Cite count: 59 (Web of Science) 62 (Scopus)
  • SJR Quartile: Q1
  • CiteScore: 5.5 (2020)
  • SJR: 2.947 (2001
  • SNIP: 1.15 (2001
  • SJR Categories: Structural Biology (Q1)

System models for PET statistical iterative reconstruction: A review

  • Iriarte A
  • Marabini R
  • Matej S
  • Sorzano CO
  • Lewitt RM

COMPUTERIZED MEDICAL IMAGING AND GRAPHICS - 1/03/2016

10.1016/j.compmedimag.2015.12.003 View source

Cite count: 35 (Web of Science) 22 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 1.738 (null)
  • CiteScore: 8.8 (2020)
  • SJR: 0.621 (2016
  • SNIP: 1.231 (2016
  • JCR 5-year Impact Factor: 1.889
  • JCR Categories: ENGINEERING, BIOMEDICAL
  • SJR Categories: Computer Graphics and Computer-Aided Design (Q1); Computer Vision and Pattern Recognition (Q2); Health Informatics (Q2); Radiological and Ultrasound Technology (Q2); Radiology, Nuclear Medicine and Imaging (Q2)

Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy

  • Sorzano C.
  • Jiménez A.
  • Mota J.
  • Vilas J.
  • Maluenda D.
  • Martínez M.
  • Ramírez-Aportela E.
  • Majtner T.
  • Segura J.
  • Sánchez-García R.
  • Rancel Y.
  • Del Caño L.
  • Conesa P.
  • Melero R.
  • Jonic S.
  • Vargas J.
  • Cazals F.
  • Freyberg Z.
  • Krieger J.
  • Bahar I.
  • Marabini R.
  • Carazo J.
... View more Collapse

Acta Crystallographica Section F-Structural Biology Communications - 1/1/2019

10.1107/s2053230x18015108

Cite count: 42 (Web of Science) 23 (Scopus)
  • JCR Quartile: Q2 (2019)
  • SJR Quartile: Q2
  • JCR Impact Factor: 0.968 (2019)
  • Category normalized Impact: 3.116 (2019)
  • JCR 5-year Impact Factor: 0.887
  • JCR Categories: BIOCHEMICAL RESEARCH METHODS
  • SJR Categories: Biophysics (Q2); Condensed Matter Physics (Q2); Medicine (miscellaneous) (Q2); Biochemistry (Q3); Genetics (Q3); Structural Biology (Q3)

Structures of Adenovirus Incomplete Particles Clarify Capsid Architecture and Show Maturation Changes of Packaging Protein L1 52/55k

  • Condezo, G.N.
  • Marabini, R.
  • Ayora, S.
  • Carazo, J.M.
  • Alba, R.
  • Chillón, M.
  • Martín, C.S.
... View more Collapse

JOURNAL OF VIROLOGY - 1/09/2015

10.1128/jvi.01453-15 View source

Cite count: 39 (Web of Science) 33 (Scopus)
  • SJR Quartile: Q1
  • JCR Impact Factor: 4.606 (2015)
  • CiteScore: 8.9 (2020)
  • SJR: 3.282 (2015
  • SNIP: 1.132 (2015
  • JCR 5-year Impact Factor: 4.428
  • JCR Categories: VIROLOGY
  • SJR Categories: Immunology (Q1); Insect Science (Q1); Microbiology (Q1); Virology (Q1)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Cite count: 4 (Web of Science) 3 (Scopus)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 0.156 (2014)
  • CiteScore: 0.8 (2020)
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods In Molecular Biology (clifton, N.j.) - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)
  • SJR Quartile: Q3
  • CiteScore: 2.2 (2020)
  • SJR: 0.751 (2013
  • SNIP: 0.362 (2013
  • SJR Categories: Genetics (Q3); Molecular Biology (Q3)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... View more Collapse

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Cite count: 9 (Web of Science) 4 (Scopus)
  • JCR Quartile: Q2 (2014)
  • Category normalized Impact: 0.312 (2014)
  • CiteScore: 0.8 (2020)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... View more Collapse

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Cite count: 5 (Web of Science) 1 (Scopus)
  • JCR Quartile: Q2 (2021)
  • Category normalized Impact: 0.595 (2021)
  • CiteScore: 2.2 (2020)
  • SJR: 0.711 (2020
  • SNIP: 0.57 (2020

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)

Volumetric constraints in 3D tomography applied to electron microscopy

  • Marabini R.
  • Herman G.
  • Sorzano C.
  • Carazo J.

Proceedings - International Symposium on Biomedical Imaging - 1/1/2002

10.1109/isbi.2002.1029339 View source

Cite count: 5 (Scopus)

Towards a data-bank of three-dimensional macromolecular structures: A WWW-based prototype

  • CARAZO, JM
  • MARABINI, R
  • VAQUERIZO, C
  • FRANK, J
  • Jouffrey, B
  • Colliex, C

Electron Microscopy 1994, Vol 1 - 1994

STUDY OF THE COLLARS EXTRACTED FROM T3 AND 029 VIRAL PARTICLES

  • MARCO, S
  • VALPUESTA, JM
  • CARAZO, JM
  • MARABINI, R
  • FUJISAWA, H
  • CARRASCOSA, JL
  • Jouffrey, B
  • Colliex, C
... View more Collapse

Electron Microscopy 1994, Vols 3a and 3b - 1994

Pattern recognition and classification of images of biological macromolecules using neural networks

  • MARABINI, R
  • CARAZO, JM
  • Jouffrey, B
  • Colliex, C

Electron Microscopy 1994, Vol 1 - 1994

Open Access

ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING

  • MARABINI, R
  • VAQUERIZO, C
  • FERNANDEZ, JJJ
  • CARAZO, JM
  • LADJADJ, M
  • ODESANYA, O
  • FRANK, J
  • Robb, RA
... View more Collapse

Visualization In Biomedical Computer 1994 - 9/09/1994

10.1117/12.185208 View source

Cite count: 1 (Web of Science) 4 (Scopus)
  • CiteScore: 0.8 (2020)

Iterative reconstruction for pet scanners with continuous scintillators

  • Iriarte A.
  • Caffarena G.
  • Lopez-Fernandez M.
  • Garcia-Carmona R.
  • Otero A.
  • Sorzano C.
  • Marabini R.
... View more Collapse

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS - 4/08/2015

10.1109/embc.2015.7318842 View source

Cite count:
  • CiteScore: 1.5 (2020)
  • SJR: 0.263 (2015
  • SNIP: 0.653 (2015

Image processing for Cellular tomography using soft X-rays

  • Sorzano, C. O. S.
  • Oton, J.
  • Cuenca, J.
  • Zaldivar-Perez, A.
  • Caffarena, G.
  • Sanchez-Jimenez, J.
  • Messaoudi, C.
  • Marco, S.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE
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2012 9th Ieee International Symposium On Biomedical Imaging (isbi) - 2012

Effects of uneven sampling in 3D reconstructions.

  • Sorzano, COS
  • Marabini, R
  • Carazo, JM
  • Rietzel, E
  • Schroeder, R
  • Herman, GT
  • Boisset, N
  • Benavides, HAC
  • Yacaman, MJ
... View more Collapse

Electron Microscopy 1998, Vol 1 - 1998

Effects of the downsampling scheme on three-dimensional electron microscopy of single particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

Wisp 2009 - 6th Ieee International Symposium On Intelligent Signal Processing - Proceedings - 10/08/2009

10.1109/wisp.2009.5286563 View source

Cite count: 3 (Scopus)
  • SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing
Open Access

Consistent and elastic registration of histological sections using vector-spline regularization

  • Arganda-Carreras, Ignacio
  • Sorzano, Carlos O. S.
  • Marabini, Roberto
  • Carazo, Jose Maria
  • Ortiz-de-Solorzano, Carlos
  • Kybic, Jan
  • Beichel, RR
... View more Collapse

COMPUTER VISION APPROACHES TO MEDICAL IMAGE ANALYSIS - 1/1/2006

10.1007/11889762_8 View source

Cite count: 262 (Web of Science) 203 (Scopus)
  • CiteScore: 1.8 (2020)
  • SJR: 0.317 (2006
  • SNIP: 0.679 (2006

This author has no patents.

Near Atomic Structure of an Atadenovirus Reveals a Conserved Capsid-Binding Motif and Intergenera Variations in Cementing Proteins

  • Roberto Marabini
  • Gabriela N. Condezo
  • Josué Gómez-Blanco
  • Carmen San Martín

Science Advances - 24/07/2020

10.1101/2020.07.24.220046

  • JCR Impact Factor: 14.143 (2020)
  • JCR 5-year Impact Factor: 16.45
  • JCR Categories: MULTIDISCIPLINARY SCIENCES
  • ORCID

Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)

  • Sorzano C.O.S.
  • Vilas J.L.
  • Ramírez-Aportela E.
  • Krieger J.
  • Del Hoyo D.
  • Herreros D.
  • Fernandez-Giménez E.
  • Marchán D.
  • De Isidro Gómez F.
  • Macías J.R.
  • Sánchez I.
  • Del Caño L.
  • Fonseca-Reyna Y.
  • Conesa P.
  • García-Mena A.
  • Burguet J.
  • García Condado J.
  • Méndez García J.
  • Martínez M.
  • Muñoz-Barrutia A.
  • Marabini R.
  • Vargas J.
  • Carazo J.M.
... View more Collapse

FARADAY DISCUSSIONS - 11/11/2022

10.1039/d2fd90074b

Cite count:
  • JCR Impact Factor: 3.4 (2022)
  • JCR 5-year Impact Factor: 3.4
  • JCR Categories: CHEMISTRY, PHYSICAL

Scopus: 23

Web of Science: 27

Scopus: 57

Web of Science: 69

Last data update: 5/18/24 5:01 AM
Next scheduled update: 5/25/24 3:00 AM