Marabini Ruiz, Roberto Author
Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy
- Sorzano C.
- Jiménez A.
- Mota J.
- Vilas J.
- Maluenda D.
- Martínez M.
- Ramírez-Aportela E.
- Majtner T.
- Segura J.
- Sánchez-García R.
- Rancel Y.
- Del Caño L.
- Conesa P.
- Melero R.
- Jonic S.
- Vargas J.
- Cazals F.
- Freyberg Z.
- Krieger J.
- Bahar I.
- Marabini R.
- Carazo J.
Acta Crystallographica Section F-Structural Biology Communications - 1/1/2019
- JCR Quartile: Q2 (2019)
- SJR Quartile: Q2
- JCR Impact Factor: 0.968 (2019)
- Category normalized Impact: 3.116 (2019)
- JCR 5-year Impact Factor: 0.887
- JCR Categories: BIOCHEMICAL RESEARCH METHODS
- SJR Categories: Biophysics (Q2); Condensed Matter Physics (Q2); Medicine (miscellaneous) (Q2); Biochemistry (Q3); Genetics (Q3); Structural Biology (Q3)
- Scopus
- ORCID
- Web of Science
Study of the collars extracted from T3 and 029 viral particles
- MARCO, S
- VALPUESTA, JM
- CARAZO, JM
- MARABINI, R
- FUJISAWA, H
- CARRASCOSA, JL
- Jouffrey, B
- Colliex, C
Electron Microscopy 1994, Vols 3a and 3b - 1994
- ORCID
- Web of Science
Structures of Adenovirus Incomplete Particles Clarify Capsid Architecture and Show Maturation Changes of Packaging Protein L1 52/55k
- Condezo, G.N.
- Marabini, R.
- Ayora, S.
- Carazo, J.M.
- Alba, R.
- Chillón, M.
- Martín, C.S.
JOURNAL OF VIROLOGY - 1/09/2015
10.1128/jvi.01453-15 View source
- SJR Quartile: Q1
- JCR Impact Factor: 4.606 (2015)
- CiteScore: 8.9 (2020)
- SJR: 3.282 (2015
- SNIP: 1.132 (2015
- JCR 5-year Impact Factor: 4.428
- JCR Categories: VIROLOGY
- SJR Categories: Immunology (Q1); Insect Science (Q1); Microbiology (Q1); Virology (Q1)
- Scopus
- ORCID
- Web of Science
Structure and Uncoating of Immature Adenovirus
- Perez-Berna, Ana J.
- Marabini, Roberto
- Scheres, Sjors H. W.
- Menendez-Conejero, Rosa
- Dmitriev, Igor P.
- Curiel, David T.
- Mangel, Walter F.
- Flint, S. Jane
- San Martin, Carmen
Journal of Molecular Biology - 18/09/2009
10.1016/j.jmb.2009.06.057 View source
- SJR Quartile: Q1
- JCR Impact Factor: 3.871 (2009)
- CiteScore: 8.5 (2020)
- SJR: 3.512 (2009
- SNIP: 1.176 (2009
- JCR 5-year Impact Factor: 4.303
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Molecular Biology (Q1); Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation
- Jiménez de la Morena J.
- Conesa P.
- Fonseca Y.C.
- de Isidro-Gómez F.P.
- Herreros D.
- Fernández-Giménez E.
- Strelak D.
- Moebel E.
- Buchholz T.O.
- Jug F.
- Martinez-Sanchez A.
- Harastani M.
- Jonic S.
- Conesa J.J.
- Cuervo A.
- Losana P.
- Sánchez I.
- Iceta M.
- del Cano L.
- Gragera M.
- Melero R.
- Sharov G.
- Castaño-Díez D.
- Koster A.
- Piccirillo J.G.
- Vilas J.L.
- Otón J.
- Marabini R.
- Sorzano C.O.S.
- Carazo J.M.
JOURNAL OF STRUCTURAL BIOLOGY - 1/9/2022
- JCR Quartile: Q2 (2022)
- JCR Impact Factor: 3 (2022)
- Category normalized Impact: 1.467 (2022)
- CiteScore: 5.3 (2021)
- SJR: 1.594 (2021
- SNIP: 0.842 (2021
- JCR 5-year Impact Factor: 3.3
- JCR Categories: BIOPHYSICS
- Scopus
- ORCID
- Web of Science
ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds
- Cuenca-Alba J.
- del Cano L.
- Gómez Blanco J.
- de la Rosa Trevín J.
- Conesa Mingo P.
- Marabini R.
- Carlos C.
- Carazo J.
Journal of Structural Biology - 1/10/2017
- SJR Quartile: Q1
- JCR Impact Factor: 3.433 (2017)
- CiteScore: 5.5 (2020)
- SJR: 3.948 (2017
- SNIP: 0.97 (2017
- JCR 5-year Impact Factor: 3.489
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
- de la Rosa-Trevin, J. M.
- Quintana, A.
- del Cano, L.
- Zaldivar, A.
- Foche, I.
- Gutierrez, J.
- Gomez-Blanco, J.
- Burguet-Castell, J.
- Cuenca-Alba, J.
- Abrishami, V.
- Vargas, J.
- Oton, J.
- Sharov, G.
- Vilas, J. L.
- Navas, J.
- Conesa, P.
- Kazemi, M.
- Marabini, R.
- Sorzano, C. O. S.
- Carazo, J. M.
JOURNAL OF STRUCTURAL BIOLOGY - 1/07/2016
10.1016/j.jsb.2016.04.010 View source
- SJR Quartile: Q1
- JCR Impact Factor: 2.767 (2016)
- CiteScore: 5.5 (2020)
- SJR: 2.732 (2016
- SNIP: 0.904 (2016
- JCR 5-year Impact Factor: 3.235
- JCR Categories: CELL BIOLOGY
- SJR Categories: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Re-examining the spectra of macromolecules. Current practice of spectral quasi B-factor flattening
- Vilas J.L.
- Vargas J.
- Martinez M.
- Ramirez-Aportela E.
- Melero R.
- Jimenez-Moreno A.
- Garduño E.
- Conesa P.
- Marabini R.
- Maluenda D.
- Carazo J.M.
- Sorzano C.O.S.
Journal of Structural Biology - 1/03/2020
- SJR Quartile: Q2
- JCR Impact Factor: 2.867 (2020)
- CiteScore: 5.5 (2020)
- SJR: 2.564 (2020
- SNIP: 1.018 (2020
- JCR 5-year Impact Factor: 4.474
- JCR Categories: BIOCHEMISTRY & MOLECULAR BIOLOGY
- SJR Categories: Structural Biology (Q2)
- Scopus
- ORCID
- Web of Science
Proposal for a new distributed database of macromolecular and subcellular structures from different areas of microscopy
- Marabini, R.
- Vaquerizo, C.
- Fernández, J.J.
- Carazo, J.M.
- Engel, A.
- Frank, J.
Journal of Structural Biology - 1/01/1996
10.1006/jsbi.1996.0026 View source
- CiteScore: 5.5 (2020)
- Scopus
- ORCID
- Web of Science
Practical issues on invariant image averaging using the Bispectrum
- Marabini, R.
- Carazo, J.M.
Signal Processing - 1/11/1994
10.1016/0165-1684(94)90063-9 View source
- CiteScore: 9.1 (2020)
- Scopus
- ORCID
- Web of Science
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.156 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- SJR Quartile: Q3
- CiteScore: 2.2 (2020)
- SJR: 0.751 (2013
- SNIP: 0.362 (2013
- SJR Categories: Genetics (Q3); Molecular Biology (Q3)
- Scopus
- ORCID
ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING
- MARABINI, R
- VAQUERIZO, C
- FERNANDEZ, JJJ
- CARAZO, JM
- LADJADJ, M
- ODESANYA, O
- FRANK, J
- Robb, RA
Visualization in Biomedical Computer 1994 - 9/09/1994
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- JCR Quartile: Q2 (2014)
- Category normalized Impact: 0.312 (2014)
- CiteScore: 0.8 (2020)
- Scopus
- ORCID
- Web of Science
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- JCR Quartile: Q2 (2021)
- Category normalized Impact: 0.595 (2021)
- CiteScore: 2.2 (2020)
- SJR: 0.711 (2020
- SNIP: 0.57 (2020
- Scopus
- ORCID
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
A GA-optimized neural network for classification of biological particles from electron-microscopy images
- Merelo, JJ
- Prieto, A
- Moran, F
- Marabini, R
- Carazo, JM
- Mira, J
- MorenoDiaz, R
- Cabestany, J
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) - 1/1/1997
10.1007/bfb0032577 View source
- CiteScore: 1.8 (2020)
- Scopus
- ORCID
- Web of Science
Electron tomography of biological specimens
- Marabini R.
- Carmen San Martin M.
- Carazo J.
Studies in Health Technology and Informatics - 1/1/1997
- CiteScore: 1.2 (2020)
- Scopus
- ORCID
Effects of the downsampling scheme on three-dimensional electron microscopy of single particles
- Sorzano, C. O. S.
- Iriarte, A.
- Marabini, R.
- Carazo, J. M.
- IEEE
WISP 2009 - 6th IEEE International Symposium on Intelligent Signal Processing - Proceedings - 10/08/2009
10.1109/wisp.2009.5286563 View source
- SJR Categories: Computer Networks and Communications; Media Technology; Signal Processing
- Scopus
- ORCID
- Web of Science
Consistent and elastic registration of histological sections using vector-spline regularization
- Arganda-Carreras, Ignacio
- Sorzano, Carlos O. S.
- Marabini, Roberto
- Carazo, Jose Maria
- Ortiz-de-Solorzano, Carlos
- Kybic, Jan
- Beichel, RR
COMPUTER VISION APPROACHES TO MEDICAL IMAGE ANALYSIS - 1/1/2006
10.1007/11889762_8 View source
- CiteScore: 1.8 (2020)
- SJR: 0.317 (2006
- SNIP: 0.679 (2006
- Scopus
- ORCID
- Web of Science
An image processing approach to the simulation of electron microscopy volumes of atomic structures
- Sorzano, C.O.S.
- Vargas, J.
- Oton, J.
- Abrishami, V.
- De La Rosa-Trevin, J.M.
- Del Riego, S.
- Fernandez-Alderete, A.
- Martinez-Rey, C.
- Marabini, R.
- Carazo, J.M.
2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/01/2014
10.1109/icip.2014.7025420 View source
- SJR Categories: Computer Vision and Pattern Recognition
- Scopus
- ORCID
- Web of Science
This author has no patents.
On the suitability of biological structure determination by electron microscopy to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/03/2005
- JCR Quartile: Q3 (2005)
- SJR Quartile: Q2
- JCR Impact Factor: 0.5 (2022)
- Category normalized Impact: 0.442 (2005)
- CiteScore: 2.1 (2020)
- SJR: 0.6 (2005
- SNIP: 1.719 (2005
- SJR Categories: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- Scopus
- ORCID
- Web of Science
Near Atomic Structure of an Atadenovirus Reveals a Conserved Capsid-Binding Motif and Intergenera Variations in Cementing Proteins
- Roberto Marabini
- Gabriela N. Condezo
- Josué Gómez-Blanco
- Carmen San Martín
Science Advances - 24/07/2020
- JCR Impact Factor: 14.143 (2020)
- JCR 5-year Impact Factor: 16.45
- JCR Categories: MULTIDISCIPLINARY SCIENCES
- ORCID
Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)
- Sorzano C.O.S.
- Vilas J.L.
- Ramírez-Aportela E.
- Krieger J.
- Del Hoyo D.
- Herreros D.
- Fernandez-Giménez E.
- Marchán D.
- De Isidro Gómez F.
- Macías J.R.
- Sánchez I.
- Del Caño L.
- Fonseca-Reyna Y.
- Conesa P.
- García-Mena A.
- Burguet J.
- García Condado J.
- Méndez García J.
- Martínez M.
- Muñoz-Barrutia A.
- Marabini R.
- Vargas J.
- Carazo J.M.
FARADAY DISCUSSIONS - 11/11/2022
- JCR Impact Factor: 3.4 (2022)
- JCR 5-year Impact Factor: 3.4
- JCR Categories: CHEMISTRY, PHYSICAL
Biological structure determination by EM is well suited to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/06/2004
- JCR Quartile: Q2 (2004)
- SJR Quartile: Q2
- JCR Impact Factor: 0.854 (2022)
- CiteScore: 2.1 (2020)
- SJR: 0.556 (2004
- SNIP: 1.19 (2004
- SJR Categories: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- Scopus
- ORCID
- Web of Science
h index
Scopus: 23
Web of Science: 27
i10 index
Scopus: 57
Web of Science: 69
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Acronym P10-TIC-06002Since: March 15, 2011Until: March 15, 2014Funded by: JUNTAFunding / grant amount: 105,730.00 EURRole: Investigador