Sánchez Sorzano, Carlos Oscar Autor

Predicting MHC I restricted T cell epitopes in mice with NAP-CNB, a novel online tool

  • Wert-Carvajal C.
  • Sánchez-García R.
  • Macías J.R.
  • Sanz-Pamplona R.
  • Pérez A.M.
  • Alemany R.
  • Veiga E.
  • Sorzano C.Ó.S.
  • Muñoz-Barrutia A.
... Ver más Contraer

Scientific Reports - 1/12/2021

10.1038/s41598-021-89927-5

Número de citas: 2 (Web of Science) 1 (Scopus)

Neutrophil subtypes shape HIV-specific CD8 T-cell responses after vaccinia virus infection

  • Di Pilato M.
  • Palomino-Segura M.
  • Mejías-Pérez E.
  • Gómez C.E.
  • Rubio-Ponce A.
  • D’Antuono R.
  • Pizzagalli D.U.
  • Pérez P.
  • Kfuri-Rubens R.
  • Benguría A.
  • Dopazo A.
  • Ballesteros I.
  • Sorzano C.O.S.
  • Hidalgo A.
  • Esteban M.
  • Gonzalez S.F.
... Ver más Contraer

npj Vaccines - 1/12/2021

10.1038/s41541-021-00314-7

Número de citas: 6 (Web of Science) 2 (Scopus)

Cryo-EM density maps adjustment for subtraction, consensus and sharpening

  • Fernández-Giménez E.
  • Martínez M.
  • Sánchez-García R.
  • Marabini R.
  • Ramírez-Aportela E.
  • Conesa P.
  • Carazo J.M.
  • Sorzano C.O.S.
... Ver más Contraer

JOURNAL OF STRUCTURAL BIOLOGY - 1/12/2021

10.1016/j.jsb.2021.107780

Número de citas: 7 (Web of Science) 1 (Scopus)
Open Access

PDBe-KB: collaboratively defining the biological context of structural data

  • Varadi, Mihaly
  • Anyango, Stephen
  • Armstrong, David
  • Berrisford, John
  • Choudhary, Preeti
  • Deshpande, Mandar
  • Nadzirin, Nurul
  • Nair, Sreenath S.
  • Pravda, Lukas
  • Tanweer, Ahsan
  • Al-Lazikani, Bissan
  • Andreini, Claudia
  • Barton, Geoffrey J.
  • Bednar, David
  • Berka, Karel
  • Blundell, Tom
  • Brock, Kelly P.
  • Maria Carazo, Jose
  • Damborsky, Jiri
  • David, Alessia
  • Dey, Sucharita
  • Dunbrack, Roland
  • Fernandez Recio, Juan
  • Fraternali, Franca
  • Gibson, Toby
  • Helmer-Citterich, Manuela
  • Hoksza, David
  • Hopf, Thomas
  • Jakubec, David
  • Kannan, Natarajan
  • Krivak, Radoslav
  • Kumar, Manjeet
  • Levy, Emmanuel D.
  • London, Nir
  • Macias, Jose Ramon
  • Srivatsan, Madhusudhan M.
  • Marks, Debora S.
  • Martens, Lennart
  • McGowan, Stuart A.
  • McGreig, Jake E.
  • Modi, Vivek
  • Gonzalo Parra, R.
  • Pepe, Gerardo
  • Piovesan, Damiano
  • Prilusky, Jaime
  • Putignano, Valeria
  • Radusky, Leandro G.
  • Ramasamy, Pathmanaban
  • Rausch, Atilio O.
  • Reuter, Nathalie
  • Rodriguez, Luis A.
  • Rollins, Nathan J.
  • Rosato, Antonio
  • Serrano, Luis
  • Singh, Gulzar
  • Skoda, Petr
  • Sorzano, Carlos Oscar S.
  • Stourac, Jan
  • Sulkowska, Joanna, I
  • Svobodova, Radka
  • Tichshenko, Natalia
  • Tosatto, Silvio C. E.
  • Vranken, Wim
  • Wass, Mark N.
  • Xue, Dandan
  • Zaidman, Daniel
  • Thornton, Janet
  • Sternberg, Michael
  • Orengo, Christine
  • Velankar, Sameer
  • PDBe-KB Consortium
... Ver más Contraer

NUCLEIC ACIDS RESEARCH - 10/11/2021

10.1093/nar/gkab988

Número de citas: 36 (Web of Science) 15 (Scopus)

Approximating deformation fields for the analysis of continuous heterogeneity of biological macromolecules by 3D Zernike polynomials

  • Herreros D.
  • Lederman R.R.
  • Krieger J.
  • Jimenez-Moreno A.
  • Martinez M.
  • Myska D.
  • Strelak D.
  • Filipovic J.
  • Bahar I.
  • Carazo J.M.
  • Sanchez C.O.S.
... Ver más Contraer

IUCrJ - 1/11/2021

10.1107/s2052252521008903

Número de citas: 9 (Web of Science)

Advances in xmipp for cryo–electron microscopy: From xmipp to scipion

  • Strelak D.
  • Jiménez-Moreno A.
  • Vilas J.L.
  • Ramírez-Aportela E.
  • Sánchez-García R.
  • Maluenda D.
  • Vargas J.
  • Herreros D.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.P.
  • Horacek J.
  • Myska D.
  • Horacek M.
  • Conesa P.
  • Fonseca-Reyna Y.C.
  • Jiménez J.
  • Martínez M.
  • Harastani M.
  • Jonić S.
  • Filipovic J.
  • Marabini R.
  • Carazo J.M.
  • Sorzano C.O.S.
... Ver más Contraer

MOLECULES - 1/10/2021

10.3390/molecules26206224

Número de citas: 17 (Web of Science)
Open Access

ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M.
  • Sorzano C.O.S.
  • Carazo J.M.
  • Georges A.d.
  • Abrishami V.
  • Vargas J.

PROGRESS IN BIOPHYSICS and MOLECULAR BIOLOGY - 1/1/2021

10.1016/j.pbiomolbio.2021.01.001

Número de citas: 2 (Web of Science) 1 (Scopus)

Enhancement of HIV-1 env-specific CD8 T cell responses using interferon-stimulated gene 15 as an immune adjuvant

  • Gómez C.E.
  • Perdiguero B.
  • Falqui M.
  • Marín M.Q.
  • Bécares M.
  • Sorzano C.Ó.S.
  • García-Arriaza J.
  • Esteban M.
  • Guerra S.
... Ver más Contraer

Journal of Virology - 1/1/2021

10.1128/jvi.01155-20

Número de citas: 5 (Web of Science) 2 (Scopus)

Scipion PKPD: an Open-Source Platform for Biopharmaceutics, Pharmacokinetics and Pharmacodynamics Data Analysis

  • Sorzano C.O.S.
  • Fonseca-Reyna Y.
  • de la Cruz-Moreno M.A.P.

PHARMACEUTICAL RESEARCH - 1/1/2021

10.1007/s11095-021-03065-1

Número de citas:

The combined vaccination protocol of DNA/MVA expressing Zika virus structural proteins as efficient inducer of T and B cell immune responses

  • Pérez P.
  • Martín-Acebes M.A.
  • Poderoso T.
  • Lázaro-Frías A.
  • Saiz J.C.
  • Sorzano C.Ó.S.
  • Esteban M.
  • García-Arriaza J.
... Ver más Contraer

Emerging Microbes and Infections - 1/1/2021

10.1080/22221751.2021.1951624

Número de citas: 6 (Web of Science) 1 (Scopus)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... Ver más Contraer

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Número de citas: 5 (Web of Science) 1 (Scopus)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... Ver más Contraer

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Número de citas: 9 (Web of Science) 4 (Scopus)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Número de citas: 4 (Web of Science) 3 (Scopus)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

Methods in Cell Biology - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 Ver en origen

Número de citas: 2 (Web of Science) 2 (Scopus)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Número de citas: 3 (Scopus)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Número de citas: 18 (Scopus)

Iterative Reconstruction for PET scanners with continuous scintillators

  • Iriarte A.
  • Caffarena G.
  • Lopez-Fernandez M.
  • Garcia-Carmona R.
  • Otero A.
  • Sorzano C.
  • Marabini R.
... Ver más Contraer

2015 37TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC) - 4/11/2015

10.1109/embc.2015.7318842 Ver en origen

Número de citas:

2D and 3D Alignment for Electron Microscopy via Graphics Processing Units

  • Garcia, Eduardo
  • Mateo, Miguel
  • Deideri, Alessandro
  • Iriarte, Ana
  • Sorzano, Carlos O. S.
  • Caffarena, Gabriel
  • Ortuno, F
  • Rojas, I
... Ver más Contraer

PROCEEDINGS IWBBIO 2014: INTERNATIONAL WORK-CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING, VOLS 1 AND 2 - 2014

Outlier detection for single particle analysis in Electron Microscopy

  • Sorzano, C. O. S.
  • Vargas, J.
  • de la Rosa-Trevin, J. M.
  • Zaldivar-Peraza, A.
  • Oton, J.
  • Abrishami, V.
  • Foche, I.
  • Marabini, R.
  • Caffarena, G.
  • Carazo, J. M.
  • Ortuno, F
  • Rojas, I
... Ver más Contraer

PROCEEDINGS IWBBIO 2014: INTERNATIONAL WORK-CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING, VOLS 1 AND 2 - 2014

Número de citas: 10 (Web of Science)

AN IMAGE PROCESSING APPROACH TO THE SIMULATION OF ELECTRON MICROSCOPY VOLUMES OF ATOMIC STRUCTURES

  • Sorzano, C.O.S.
  • Vargas, J.
  • Oton, J.
  • Abrishami, V.
  • De La Rosa-Trevin, J.M.
  • Del Riego, S.
  • Fernandez-Alderete, A.
  • Martinez-Rey, C.
  • Marabini, R.
  • Carazo, J.M.
... Ver más Contraer

2014 IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP) - 28/1/2014

10.1109/icip.2014.7025420 Ver en origen

Número de citas:

ELASTIC IMAGE REGISTRATION TO FULLY EXPLORE MACROMOLECULAR DYNAMICS BY ELECTRON MICROSCOPY

  • Jin Q.
  • Sorzano C.
  • Callebaut I.
  • Tama F.
  • Jonic S.

2014 IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP) - 28/1/2014

10.1109/icip.2014.7025416 Ver en origen

Número de citas:

Image processing for Cellular tomography using soft X-rays

  • Sorzano, C. O. S.
  • Oton, J.
  • Cuenca, J.
  • Zaldivar-Perez, A.
  • Caffarena, G.
  • Sanchez-Jimenez, J.
  • Messaoudi, C.
  • Marco, S.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE
... Ver más Contraer

2012 9TH IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI) - 2012

Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows

  • Li, Ming
  • Xu, Guoliang
  • Sorzano, Carlos O. S.
  • Melero, Roberto
  • Bajaj, Chandrajit
  • Yu, W
  • Zhang, M
  • Wang, L
  • Song, Y
... Ver más Contraer

2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010

Electric-potential reconstructions of single particles using L 2-gradient flows

  • Li M.
  • Xu G.
  • Sorzano C.
  • Melero R.
  • Bajaj C.

Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010

10.1109/bmei.2010.5639445

Número de citas: 1 (Scopus)

Clustering of Biomedical Scientific Papers

  • Bravo-Alcobendas D.
  • Sorzano C.

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009

10.1109/wisp.2009.5286530 Ver en origen

Número de citas: 2 (Web of Science) 2 (Scopus)

Effects of the Downsampling Scheme on Three-dimensional Electron Microscopy of Single Particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009

10.1109/wisp.2009.5286563 Ver en origen

Número de citas: 3 (Scopus)

Este autor no tiene patentes.

Unraveling the Power of NAP-CNB's Machine Learning-enhanced Tumor Neoantigen Prediction

  • Almudena Mendez-Perez
  • Andres M Acosta-Moreno
  • Carlos Wert-Carvajal
  • Pilar Ballesteros-Cuartero
  • Ruben Sanchez-Garcia
  • Jose R Macias
  • Rebeca Sanz-Pamplona
  • Ramon Alemany
  • Carlos Oscar S Sorzano
  • Arrate Munoz-Barrutia
  • Esteban Veiga
... Ver más Contraer

22/11/2023

10.1101/2023.11.22.568042

  • ORCID

Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing

  • James Michael Krieger
  • Carlos Oscar S. Sorzano
  • Jose Maria Carazo

International Journal of Molecular Sciences - 10/08/2023

10.3390/ijms241814245

Número de citas: 2 (Web of Science) 2 (Scopus)

Statistical experiment design for animal research

  • Carlos Oscar S. Sorzano

2/06/2023

10.31219/osf.io/e9s25

  • ORCID

Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)

  • Sorzano C.O.S.
  • Vilas J.L.
  • Ramírez-Aportela E.
  • Krieger J.
  • Del Hoyo D.
  • Herreros D.
  • Fernandez-Giménez E.
  • Marchán D.
  • De Isidro Gómez F.
  • Macías J.R.
  • Sánchez I.
  • Del Caño L.
  • Fonseca-Reyna Y.
  • Conesa P.
  • García-Mena A.
  • Burguet J.
  • García Condado J.
  • Méndez García J.
  • Martínez M.
  • Muñoz-Barrutia A.
  • Marabini R.
  • Vargas J.
  • Carazo J.M.
... Ver más Contraer

FARADAY DISCUSSIONS - 11/11/2022

10.1039/d2fd90074b

Número de citas:
Open Access

Erratum: The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation (PLoS Pathog (2022) 18:7 (e1010631) DOI: 10.1371/journal.ppat.1010631)

  • Ginex T.
  • Marco-Marín C.
  • Wieczór M.
  • Mata C.
  • Krieger J.
  • Ruiz-Rodriguez P.
  • López-Redondo M.L.
  • Francés-Gómez C.
  • Melero R.
  • Sánchez-Sorzano C.Ó.
  • Martínez M.
  • Gougeard N.
  • Forcada-Nadal A.
  • Zamora-Caballero S.
  • Gozalbo-Rovira R.
  • Sanz-Frasquet C.
  • Arranz R.
  • Bravo J.
  • Rubio V.
  • Marina A.
  • Geller R.
  • Comas I.
  • Gil C.
  • Coscolla M.
  • Orozco M.
  • Llácer J.L.
  • Carazo J.M.
... Ver más Contraer

PLoS Pathogens - 1/11/2022

10.1371/journal.ppat.1010995

Número de citas:

Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming

  • Blanca Soler Palacios
  • Ricardo Villares
  • Pilar Lucas
  • Jose Miguel Rodriguez Frade
  • Ana Cayuela
  • Jonathan Gabriel Piccirillo
  • David Delgado Gestoso
  • Cristina Risco
  • Fernando Corrales
  • Carlos Oscar S Sorzano
  • Nuria Martinez
  • Jose Javier Conesa
  • Francisco J. Iborra
  • Mario Mellado
... Ver más Contraer

Frontiers in Immunology - 22/08/2022

10.1101/2022.08.22.504729

Número de citas:

Automatic determination of the handedness of Single-Particle maps of macromolecules solved by CryoEM

  • J. Garcia Condado
  • A. Muñoz-Barrutia
  • C.O.S. Sorzano

JOURNAL OF STRUCTURAL BIOLOGY - 4/03/2022

10.1016/j.jsb.2022.107915

Número de citas:
Open Access

The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation

  • Tiziana Ginex
  • Clara Marco-Marín
  • Miłosz Wieczór
  • Carlos P. Mata
  • James Krieger
  • Maria Luisa López-Redondo
  • Clara Francés-Gómez
  • Paula Ruiz-Rodriguez
  • Roberto Melero
  • Carlos Óscar Sánchez-Sorzano
  • Marta Martínez
  • Nadine Gougeard
  • Alicia Forcada-Nadal
  • Sara Zamora-Caballero
  • Roberto Gozalbo-Rovira
  • Carla Sanz-Frasquet
  • Jeronimo Bravo
  • Vicente Rubio
  • Alberto Marina
  • Ron Geller
  • Iñaki Comas
  • Carmen Gil
  • Mireia Coscolla
  • Modesto Orozco
  • José Luis Llácer
  • José-Maria Carazo
... Ver más Contraer

PLoS Pathogens - 7/12/2021

10.1371/journal.ppat.1010631

Número de citas: 8 (Web of Science)

Cryo-EM Structure of a Tetrameric Photosystem I from Chroococcidiopsis TS-821, a Thermophilic, Non-heterocyst-forming Cyanobacteria

  • Dmitry Semchonok
  • Jyotirmoy Mondal
  • Connor Cooper
  • Katrina Schlum
  • Meng Li
  • Muhamed Amin
  • Carlos Sanchez Sorzano
  • Erney Ramírez-Aportela
  • Panagiotis Kastritis
  • Egbert Boekema
  • Albert Guskov
  • Barry Bruce
... Ver más Contraer

Plant Communications - 19/10/2020

10.21203/rs.3.rs-81702/v1

Número de citas: 8 (Web of Science) 2 (Scopus)

NAP-CNB: Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice

  • Carlos Wert-Carvajal
  • Rubén Sánchez-García
  • José R Macías
  • Rebeca Sanz-Pamplona
  • Almudena Méndez Pérez
  • Ramon Alemany
  • Esteban Veiga Chacón
  • Carlos Óscar S. Sorzano
  • Arrate Muñoz-Barrutia
... Ver más Contraer

5/10/2020

10.1101/2020.10.05.327015

  • ORCID

Scopus: 36

Web of Science: 42

Scopus: 129

Web of Science: 163

Última actualización de los datos: 23/03/24 8:38
Próxima recolección programada: 30/03/24 3:00