Sánchez Sorzano, Carlos Oscar Author

Open Access

Cryo-soft X-ray tomography as a quantitative three-dimensional tool to model nanoparticle:cell interaction

  • Chiappi, Michele
  • Javier Conesa, Jose
  • Pereiro, Eva
  • Sanchez Sorzano, Carlos Oscar
  • Josefa Rodriguez, Maria
  • Henzler, Katja
  • Schneider, Gerd
  • Javier Chichon, Francisco
  • Carrascosa, Jose L.
... View more Collapse

JOURNAL OF NANOBIOTECHNOLOGY - 3/03/2016

10.1186/s12951-016-0170-4 View source

Cite count: 45 (Web of Science) 33 (Scopus)

CTF Challenge: Result summary

  • Marabini, R.
  • Carragher, B.
  • Chen, S.
  • Chen, J.
  • Cheng, A.
  • Downing, K.H.
  • Frank, J.
  • Grassucci, R.A.
  • Bernard Heymann, J.
  • Jiang, W.
  • Jonic, S.
  • Liao, H.Y.
  • Ludtke, S.J.
  • Patwari, S.
  • Piotrowski, A.L.
  • Quintana, A.
  • Sorzano, C.O.S.
  • Stahlberg, H.
  • Vargas, J.
  • Voss, N.R.
  • Chiu, W.
  • Carazo, J.M.
... View more Collapse

JOURNAL OF STRUCTURAL BIOLOGY - 1/06/2015

10.1016/j.jsb.2015.04.003 View source

Cite count: 26 (Web of Science) 23 (Scopus)

Data management challenges in three-dimensional EM

  • Patwardhan, Ardan
  • Carazo, Jose-Maria
  • Carragher, Bridget
  • Henderson, Richard
  • Heymann, J. Bernard
  • Hill, Emma
  • Jensen, Grant J.
  • Lagerstedt, Ingvar
  • Lawson, Catherine L.
  • Ludtke, Steven J.
  • Mastronarde, David
  • Moore, William J.
  • Roseman, Alan
  • Rosenthal, Peter
  • Sorzano, Carlos-Oscar S.
  • Sanz-Garcia, Eduardo
  • Scheres, Sjors H. W.
  • Subramaniam, Sriram
  • Westbrook, John
  • Winn, Martyn
  • Swedlow, Jason R.
  • Kleywegt, Gerard J.
... View more Collapse

NATURE STRUCTURAL and MOLECULAR BIOLOGY - 1/12/2012

10.1038/nsmb.2426 View source

Cite count: 35 (Web of Science) 30 (Scopus)

DeepAlign, a 3D alignment method based on regionalized deep learning for Cryo-EM

  • Jiménez-Moreno A.
  • Střelák D.
  • Filipovič J.
  • Carazo J.M.
  • Sorzano C.O.S.

JOURNAL OF STRUCTURAL BIOLOGY - 1/6/2021

10.1016/j.jsb.2021.107712

Cite count: 8 (Web of Science) 1 (Scopus)
Open Access

Deep Consensus, a deep learning-based approach for particle pruning in cryo-electron microscopy

  • Sanchez-Garcia, Ruben
  • Segura, Joan
  • Maluenda, David
  • Maria Carazo, Jose
  • Sorzano, Carlos Oscar S.

IUCrJ - 1/11/2018

10.1107/s2052252518014392 View source

Cite count: 33 (Web of Science) 18 (Scopus)
Open Access

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Sanchez-Garcia R.
  • Gomez-Blanco J.
  • Cuervo A.
  • Carazo J.M.
  • Sorzano C.O.S.
  • Vargas J.

Communications Biology - 1/12/2021

10.1038/s42003-021-02399-1

Cite count: 344 (Web of Science) 21 (Scopus)

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez-Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S. Sorzano
  • Javier Vargas

Communications Biology - 15/07/2021

10.1038/s42003-021-02399-1

  • ORCID
Open Access

DeepRes: A new deep-learning- and aspect-based local resolution method for electron-microscopy maps

  • Ramírez-Aportela E.
  • Mota J.
  • Conesa P.
  • Carazo J.
  • Sorzano C.

IUCrJ - 1/11/2019

10.1107/s2052252519011692

Cite count: 34 (Web of Science) 15 (Scopus)
Open Access

Deletion of the Vaccinia Virus Gene A46R, Encoding for an Inhibitor of TLR Signalling, Is an Effective Approach to Enhance the Immunogenicity in Mice of the HIV/AIDS Vaccine Candidate NYVAC-C

  • Perdiguero, Beatriz
  • Elena Gomez, Carmen
  • Di Pilato, Mauro
  • Sorzano, Carlos Oscar S.
  • Delaloye, Julie
  • Roger, Thierry
  • Calandra, Thierry
  • Pantaleo, Giuseppe
  • Esteban, Mariano
... View more Collapse

PLoS ONE - 17/09/2013

10.1371/journal.pone.0074831 View source

Cite count: 23 (Web of Science) 20 (Scopus)

Deletion of the vaccinia virus N2L gene encoding an inhibitor of IRF3 improves the immunogenicity of modified vaccinia virus ankara expressing HIV-1 antigens

  • Garcia-Arriaza, Juan
  • Gomez, Carmen E.
  • Sorzano, Carlos Oscar S.
  • Esteban, Mariano

Journal of Virology - 1/03/2014

10.1128/jvi.02723-13 View source

Cite count: 38 (Web of Science) 32 (Scopus)

Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy

  • Carazo J.
  • Herman G.
  • Sorzano C.
  • Marabini R.

Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006

10.1007/978-0-387-69008-7_8

Cite count: 18 (Scopus)
Open Access

Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods

  • Sorzano C.O.S.
  • Jiménez-Moreno A.
  • Maluenda D.
  • Ramírez-Aportela E.
  • Martínez M.
  • Cuervo A.
  • Melero R.
  • Conesa J.J.
  • Sánchez-García R.
  • Strelak D.
  • Filipovic J.
  • Fernández-Giménez E.
  • de Isidro-Gómez F.
  • Herreros D.
  • Conesa P.
  • del Caño L.
  • Fonseca Y.
  • de la Morena J.J.
  • Macías J.R.
  • Losana P.
  • Marabini R.
  • Carazo J.M.
... View more Collapse

Methods in Molecular Biology - 1/1/2021

10.1007/978-1-0716-1406-8_13

Cite count: 5 (Web of Science) 1 (Scopus)

Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards

  • Sorzano C.
  • Marabini R.
  • Vargas J.
  • Otón J.
  • Cuenca-Alba J.
  • Quintana A.
  • de la Rosa-Trevín J.
  • Carazo J.
... View more Collapse

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_2

Cite count: 9 (Web of Science) 4 (Scopus)

Processing of Transmission Electron Microscopy Images for Single-Particle Analysis of Macromolecular Complexes

  • Devaux, Zaelle
  • Sorzano, Carlos Oscar S.
  • Jonic, Slavica
  • Conn, PM

Methods in Cell Biology - 1/1/2012

10.1016/b978-0-12-405914-6.00016-0 View source

Cite count: 2 (Web of Science) 2 (Scopus)
Open Access

Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy

  • Sorzano C.
  • De La Rosa Trevín J.
  • Otón J.
  • Vega J.
  • Cuenca J.
  • Zaldívar-Peraza A.
  • Gómez-Blanco J.
  • Vargas J.
  • Quintana A.
  • Marabini R.
  • Carazo J.
... View more Collapse

Methods in Molecular Biology - 1/1/2013

10.1007/978-1-62703-137-0_11

Cite count: 14 (Scopus)

Soft X-ray tomography imaging for biological samples

  • Otón J.
  • Sorzano C.
  • Chichón F.
  • Carrascosa J.
  • Carazo J.
  • Marabini R.

Applied and Numerical Harmonic Analysis - 1/1/2014

10.1007/978-1-4614-9521-5_8

Cite count: 4 (Web of Science) 3 (Scopus)

Splines in Biomedical Image Processing

  • Jonic S.
  • Sorzano C.

Optical and Digital Image Processing: Fundamentals and Applications - 29/4/2011

10.1002/9783527635245.ch6

Cite count: 3 (Scopus)

A fuzzy constraint satisfaction approach to identify and characterize apnea episodes

  • Otero A.
  • Sorzano C.
  • Félix P.
  • Álvarez M.
  • Zamarrón C.

2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 - 1/1/2008

10.1109/icbbe.2008.835

Cite count: 2 (Scopus)

AMON: A software system for automatic generation of ontology mappings

  • Sanchez-Alberca, Alfredo
  • Garcia-Garcia, Raul
  • Sorzano, Carlos Oscar S.
  • Gutierrez-Cossio, Celia
  • Chagoyen, Monica
  • Lopez, Mariano Fernandez
  • Bento, C
  • Cardoso, A
  • Dias, G
... View more Collapse

2005 Portuguese Conference on Artificial Intelligence, Proceedings - 2005

10.1109/epia.2005.341277 View source

An image processing approach to the simulation of electron microscopy volumes of atomic structures

  • Sorzano, C.O.S.
  • Vargas, J.
  • Oton, J.
  • Abrishami, V.
  • De La Rosa-Trevin, J.M.
  • Del Riego, S.
  • Fernandez-Alderete, A.
  • Martinez-Rey, C.
  • Marabini, R.
  • Carazo, J.M.
... View more Collapse

2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/01/2014

10.1109/icip.2014.7025420 View source

Cite count:

Clustering of biomedical scientific papers

  • Bravo-Alcobendas D.
  • Sorzano C.

WISP 2009: 6TH IEEE INTERNATIONAL SYMPOSIUM ON INTELLIGENT SIGNAL PROCESSING, PROCEEDINGS - 10/12/2009

10.1109/wisp.2009.5286530 View source

Cite count: 2 (Web of Science) 2 (Scopus)
Open Access

Consistent and elastic registration of histological sections using vector-spline regularization

  • Arganda-Carreras, Ignacio
  • Sorzano, Carlos O. S.
  • Marabini, Roberto
  • Carazo, Jose Maria
  • Ortiz-de-Solorzano, Carlos
  • Kybic, Jan
  • Beichel, RR
... View more Collapse

COMPUTER VISION APPROACHES TO MEDICAL IMAGE ANALYSIS - 1/1/2006

10.1007/11889762_8 View source

Cite count: 262 (Web of Science) 203 (Scopus)

Effects of the downsampling scheme on three-dimensional electron microscopy of single particles

  • Sorzano, C. O. S.
  • Iriarte, A.
  • Marabini, R.
  • Carazo, J. M.
  • IEEE

WISP 2009 - 6th IEEE International Symposium on Intelligent Signal Processing - Proceedings - 10/08/2009

10.1109/wisp.2009.5286563 View source

Cite count: 3 (Scopus)

Elastic image registration to fully explore macromolecular dynamics by electron microscopy

  • Jin Q.
  • Sorzano C.
  • Callebaut I.
  • Tama F.
  • Jonic S.

2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/1/2014

10.1109/icip.2014.7025416 View source

Cite count:

Elastic image registration with applications to proteomics

  • Sorzano, C. O. S.
  • Thevenaz, P.
  • Valdes, I.
  • Beloso, A.
  • Unser, M.
  • Cristobal, G
  • Javidi, B
  • Vallmitjana, S
... View more Collapse

INFORMATION OPTICS - 1/12/2006

10.1063/1.2361232 View source

Cite count: 1 (Web of Science) 3 (Scopus)

Electric-Potential Reconstructions of Single Particles Using L-2-Gradient Flows

  • Li, Ming
  • Xu, Guoliang
  • Sorzano, Carlos O. S.
  • Melero, Roberto
  • Bajaj, Chandrajit
  • Yu, W
  • Zhang, M
  • Wang, L
  • Song, Y
... View more Collapse

2010 3RD INTERNATIONAL CONFERENCE ON BIOMEDICAL ENGINEERING AND INFORMATICS (BMEI 2010), VOLS 1-7 - 2010

Electric-potential reconstructions of single particles using L <sup>2</sup>-gradient flows

  • Li M.
  • Xu G.
  • Sorzano C.
  • Melero R.
  • Bajaj C.

Proceedings - 2010 3rd International Conference on Biomedical Engineering and Informatics, BMEI 2010 - 1/12/2010

10.1109/bmei.2010.5639445

Cite count: 1 (Scopus)

This author has no patents.

Automatic determination of the handedness of Single-Particle maps of macromolecules solved by CryoEM

  • J. Garcia Condado
  • A. Muñoz-Barrutia
  • C.O.S. Sorzano

JOURNAL OF STRUCTURAL BIOLOGY - 4/03/2022

10.1101/2022.03.01.482513

Cite count:

Automatic local resolution-based sharpening of cryo-EM maps.

  • Ramirez-Aportela E
  • Vilas JL
  • Melero R
  • Conesa P
  • Martinez M
  • Maluenda D
  • Mota J
  • Jimenez A
  • Vargas J
  • Marabini R
  • Carazo JM
  • Sorzano COS
... View more Collapse

10/2018

10.1101/433284

  • ORCID

Cryo-EM Structure of a Tetrameric Photosystem I from Chroococcidiopsis TS-821, a Thermophilic, Non-heterocyst-forming Cyanobacteria

  • Dmitry Semchonok
  • Jyotirmoy Mondal
  • Connor Cooper
  • Katrina Schlum
  • Meng Li
  • Muhamed Amin
  • Carlos Sanchez Sorzano
  • Erney Ramírez-Aportela
  • Panagiotis Kastritis
  • Egbert Boekema
  • Albert Guskov
  • Barry Bruce
... View more Collapse

Plant Communications - 19/10/2020

10.21203/rs.3.rs-81702/v1

Cite count: 8 (Web of Science) 2 (Scopus)

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

  • Ruben Sanchez Garcia
  • Josue Gomez-Blanco
  • Ana Cuervo
  • Jose Maria Carazo
  • Carlos Oscar S Sorzano
  • Javier Vargas

13/06/2020

10.1101/2020.06.12.148296

  • ORCID

ENRICH: a fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M
  • Sorzano COS
  • Des Georges A
  • Carazo JM
  • Vargas J

08/2018

10.1101/400317

  • ORCID
Open Access

ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions

  • Kazemi M.
  • Sorzano C.O.S.
  • Carazo J.M.
  • Georges A.d.
  • Abrishami V.
  • Vargas J.

Progress In Biophysics & Molecular Biology - 1/09/2021

10.1016/j.pbiomolbio.2021.01.001

Cite count: 2 (Web of Science) 1 (Scopus)

Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)

  • Sorzano C.O.S.
  • Vilas J.L.
  • Ramírez-Aportela E.
  • Krieger J.
  • Del Hoyo D.
  • Herreros D.
  • Fernandez-Giménez E.
  • Marchán D.
  • De Isidro Gómez F.
  • Macías J.R.
  • Sánchez I.
  • Del Caño L.
  • Fonseca-Reyna Y.
  • Conesa P.
  • García-Mena A.
  • Burguet J.
  • García Condado J.
  • Méndez García J.
  • Martínez M.
  • Muñoz-Barrutia A.
  • Marabini R.
  • Vargas J.
  • Carazo J.M.
... View more Collapse

FARADAY DISCUSSIONS - 11/11/2022

10.1039/d2fd90074b

Cite count:
Open Access

Erratum: The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation (PLoS Pathog (2022) 18:7 (e1010631) DOI: 10.1371/journal.ppat.1010631)

  • Ginex T.
  • Marco-Marín C.
  • Wieczór M.
  • Mata C.
  • Krieger J.
  • Ruiz-Rodriguez P.
  • López-Redondo M.L.
  • Francés-Gómez C.
  • Melero R.
  • Sánchez-Sorzano C.Ó.
  • Martínez M.
  • Gougeard N.
  • Forcada-Nadal A.
  • Zamora-Caballero S.
  • Gozalbo-Rovira R.
  • Sanz-Frasquet C.
  • Arranz R.
  • Bravo J.
  • Rubio V.
  • Marina A.
  • Geller R.
  • Comas I.
  • Gil C.
  • Coscolla M.
  • Orozco M.
  • Llácer J.L.
  • Carazo J.M.
... View more Collapse

PLoS Pathogens - 1/11/2022

10.1371/journal.ppat.1010995

Cite count:

Growth hormone remodels the 3D-structure of the mitochondria of inflammatory macrophages and promotes metabolic reprogramming

  • Blanca Soler Palacios
  • Ricardo Villares
  • Pilar Lucas
  • Jose Miguel Rodriguez Frade
  • Ana Cayuela
  • Jonathan Gabriel Piccirillo
  • David Delgado Gestoso
  • Cristina Risco
  • Fernando Corrales
  • Carlos Oscar S Sorzano
  • Nuria Martinez
  • Jose Javier Conesa
  • Francisco J. Iborra
  • Mario Mellado
... View more Collapse

Frontiers in Immunology - 22/08/2022

10.1101/2022.08.22.504729

Cite count:

Improvements on marker-free images alignment for electron tomography

  • C.O.S. Sorzano
  • F. de Isidro-Gómez
  • E. Fernández-Giménez
  • D. Herreros
  • S. Marco
  • J.M. Carazo
  • C. Messaoudi
... View more Collapse

Journal of Structural Biology: X - 24/05/2020

10.1101/2020.05.22.110445

Cite count: 8 (Web of Science)

Scopus: 36

Web of Science: 42

Scopus: 129

Web of Science: 163

Last data update: 5/18/24 8:47 AM
Next scheduled update: 5/25/24 3:00 AM