Carazo García, José María Autor
The Electron Microscopy eXchange (EMX) initiative.
- Marabini R
- Ludtke SJ
- Murray SC
- Chiu W
- de la Rosa-Trevín JM
- Patwardhan A
- Heymann JB
- Carazo JM
Journal of Structural Biology - 1/05/2016
10.1016/j.jsb.2016.02.008 Ver en origen
- Cuartil SJR: Q1
- Factor Impacto JCR: 2,767 (2016)
- CiteScore: 5,5 (2020)
- SJR: 2,732 (2016)
- SNIP: 0,904 (2016)
- Impacto JCR a 5 años: 3,235
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions
- Jonic, S.
- Vargas, J.
- Melero, R.
- Gomez-Blanco, J.
- Carazo, J. M.
- Sorzano, C. O. S.
JOURNAL OF STRUCTURAL BIOLOGY - 1/06/2016
10.1016/j.jsb.2016.04.007 Ver en origen
- Cuartil JCR: Q2 (2016)
- Cuartil SJR: Q1
- Factor Impacto JCR: 2,767 (2022)
- Impacto Normalizado por Categoría: 0,469 (2016)
- CiteScore: 5,5 (2020)
- SJR: 2,732 (2016)
- SNIP: 0,904 (2016)
- Impacto JCR a 5 años: 3,235
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
Local analysis of strains and rotations for macromolecular electron microscopy maps
- Sorzano, C. O. S.
- Martin-Ramos, A.
- Prieto, F.
- Melero, R.
- Martin-Benito, J.
- Jonic, S.
- Navas-Calvente, J.
- Vargas, J.
- Oton, J.
- Abrishami, V.
- de la Rosa-Trevin, J. M.
- Gomez-Blanco, J.
- Vilas, J. L.
- Marabini, R.
- Carazo, J. M.
JOURNAL OF STRUCTURAL BIOLOGY - 1/07/2016
10.1016/j.jsb.2016.04.001 Ver en origen
- Cuartil SJR: Q1
- Factor Impacto JCR: 2,767 (2016)
- CiteScore: 5,5 (2020)
- SJR: 2,732 (2016)
- SNIP: 0,904 (2016)
- Impacto JCR a 5 años: 3,235
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
- de la Rosa-Trevin, J. M.
- Quintana, A.
- del Cano, L.
- Zaldivar, A.
- Foche, I.
- Gutierrez, J.
- Gomez-Blanco, J.
- Burguet-Castell, J.
- Cuenca-Alba, J.
- Abrishami, V.
- Vargas, J.
- Oton, J.
- Sharov, G.
- Vilas, J. L.
- Navas, J.
- Conesa, P.
- Kazemi, M.
- Marabini, R.
- Sorzano, C. O. S.
- Carazo, J. M.
JOURNAL OF STRUCTURAL BIOLOGY - 1/07/2016
10.1016/j.jsb.2016.04.010 Ver en origen
- Cuartil SJR: Q1
- Factor Impacto JCR: 2,767 (2016)
- CiteScore: 5,5 (2020)
- SJR: 2,732 (2016)
- SNIP: 0,904 (2016)
- Impacto JCR a 5 años: 3,235
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
Asymmetric cryo-EM reconstruction of phage MS2 reveals genome structure in situ
- Koning, Roman I.
- Gomez-Blanco, Josue
- Akopjana, Inara
- Vargas, Javier
- Kazaks, Andris
- Tars, Kaspars
- Maria Carazo, Jose
- Koster, Abraham J.
Nature Communications - 26/08/2016
- Cuartil SJR: Q1
- Factor Impacto JCR: 12,124 (2016)
- CiteScore: 20 (2020)
- SJR: 6,414 (2016)
- SNIP: 2,916 (2016)
- Impacto JCR a 5 años: 13,092
- Categorías JCR: MULTIDISCIPLINARY SCIENCES
- Categorías SJR: Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Chemistry (miscellaneous) (Q1); Physics and Astronomy (miscellaneous) (Q1)
- ORCID
- Scopus
- Web of Science
Characterization of transfer function, resolution and depth of field of a soft X-ray microscope applied to tomography enhancement by Wiener deconvolution
- Oton, Joaquin
- Pereiro, Eva
- Perez-Berna, Ana J.
- Millach, Laia
- Sorzano, Carlos Oscar S.
- Marabini, Roberto
- Carazo, Jose M.
Biomedical Optics Express - 1/12/2016
10.1364/boe.7.005092 Ver en origen
- Cuartil SJR: Q1
- Factor Impacto JCR: 3,337 (2016)
- CiteScore: 7,2 (2020)
- SJR: 1,453 (2016)
- SNIP: 1,456 (2016)
- Impacto JCR a 5 años: 3,544
- Categorías JCR: OPTICS
- Categorías SJR: Atomic and Molecular Physics, and Optics (Q1); Biotechnology (Q1)
- ORCID
- Scopus
- Web of Science
Fast and automatic identification of particle tilt pairs based on Delaunay triangulation.
- Vilas, J. L.
- Navas, J.
- Gomez-Blanco, J.
- de la Rosa-Trevin, J. M.
- Melero, R.
- Peschiera, I.
- Ferlenghi, I.
- Cuenca, J.
- Marabini, R.
- Carazo, J. M.
- Vargas, J.
- Sorzano, C. O. S.
Journal of Structural Biology - 1/12/2016
10.1016/j.jsb.2016.10.007 Ver en origen
- Cuartil SJR: Q1
- Factor Impacto JCR: 2,767 (2016)
- CiteScore: 5,5 (2020)
- SJR: 2,732 (2016)
- SNIP: 0,904 (2016)
- Impacto JCR a 5 años: 3,235
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
Foil-hole and data image quality assessment in 3DEM: Towards high-throughput image acquisition in the electron microscope
- Vargas, J.
- Franken, E.
- Sorzano, C. O. S.
- Gomez-Blanco, J.
- Schoenmakers, R.
- Koster, A. J.
- Carazo, J. M.
Journal of Structural Biology - 1/12/2016
10.1016/j.jsb.2016.10.006 Ver en origen
- Cuartil SJR: Q1
- Factor Impacto JCR: 2,767 (2016)
- CiteScore: 5,5 (2020)
- SJR: 2,732 (2016)
- SNIP: 0,904 (2016)
- Impacto JCR a 5 años: 3,235
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q1)
- ORCID
- Scopus
- Web of Science
A review of resolution measures and related aspects in 3D Electron Microscopy.
- Sorzano CO
- Vargas J
- Otón J
- Abrishami V
- de la Rosa-Trevín JM
- Gómez-Blanco J
- Vilas JL
- Marabini R
- Carazo JM
Progress in Biophysics and Molecular Biology - 1/03/2017
10.1016/j.pbiomolbio.2016.09.005 Ver en origen
- Cuartil JCR: Q2 (2017)
- Cuartil SJR: Q1
- Factor Impacto JCR: 3,427 (2022)
- Impacto Normalizado por Categoría: 0,501 (2017)
- CiteScore: 5,8 (2020)
- SJR: 1,446 (2017)
- SNIP: 1,236 (2017)
- Impacto JCR a 5 años: 3,125
- Categorías JCR: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Categorías SJR: Biophysics (Q1); Molecular Biology (Q2)
- ORCID
- Scopus
- Web of Science
Electron microscopy structural insights into CPAP oligomeric behavior: A plausible assembly process of a supramolecular scaffold of the centrosome
- Alvarez-Cabrera, Ana L.
- Delgado, Sandra
- Gil-Carton, David
- Mortuza, Gulnahar B.
- Montoya, Guillermo
- Sorzano, Carlos O. S.
- Tang, Tang K.
- Carazo, Jose M.
Frontiers in Molecular Biosciences - 27/03/2017
10.3389/fmolb.2017.00017 Ver en origen
- Cuartil JCR: Q2 (2017)
- Cuartil SJR: Q1
- Impacto Normalizado por Categoría: 0,159 (2017)
- Categorías SJR: Biochemistry (Q1); Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1); Molecular Biology (Q2)
- Web of Science
- Scopus
- ORCID
ON A PROTOTYPE FOR A NEW DISTRIBUTED DATA-BASE OF VOLUME DATA OBTAINED BY 3D IMAGING
- MARABINI, R
- VAQUERIZO, C
- FERNANDEZ, JJJ
- CARAZO, JM
- LADJADJ, M
- ODESANYA, O
- FRANK, J
- Robb, RA
Visualization in Biomedical Computer 1994 - 9/09/1994
10.1117/12.185208 Ver en origen
- CiteScore: 0,8 (2020)
- ORCID
- Scopus
- Web of Science
A GA-optimized neural network for classification of biological particles from electron-microscopy images
- Merelo, JJ
- Prieto, A
- Moran, F
- Marabini, R
- Carazo, JM
- Mira, J
- MorenoDiaz, R
- Cabestany, J
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) - 1/1/1997
10.1007/bfb0032577 Ver en origen
- CiteScore: 1,8 (2020)
- ORCID
- Scopus
- Web of Science
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
Exploring the conformational flexibility of molecular machines
- Sjors Scheres
- Herman, Gabor T.
- Jose Maria Carazo Garcia
Mathematical Methods In Biomedical Imaging and Intensity-modulated Radiation Therapy (imrt) - 2008
- ORCID
AN INTRODUCTION TO MAXIMUM-LIKELIHOOD METHODS IN CRYO-EM
- Sigworth, Fred J.
- Doerschuk, Peter C.
- Carazo, Jose-Maria
- Scheres, Sjors H. W.
- Jensen, GJ
Methods in Enzymology - 1/1/2010
- Factor Impacto JCR: 1,626 (2010)
- CiteScore: 2,6 (2020)
- SJR: 1,408 (2010)
- SNIP: 0,493 (2010)
- Impacto JCR a 5 años: 2,185
- Categorías JCR: BIOCHEMICAL RESEARCH METHODS
- ORCID
- Scopus
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- Cuartil SJR: Q3
- CiteScore: 2,2 (2020)
- SJR: 0,751 (2013)
- SNIP: 0,362 (2013)
- Categorías SJR: Genetics (Q3); Molecular Biology (Q3)
- ORCID
- Scopus
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- Cuartil JCR: Q2 (2014)
- Impacto Normalizado por Categoría: 0,312 (2014)
- CiteScore: 0,8 (2020)
- Scopus
- ORCID
- Web of Science
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- Cuartil JCR: Q2 (2014)
- Impacto Normalizado por Categoría: 0,156 (2014)
- CiteScore: 0,8 (2020)
- ORCID
- Scopus
- Web of Science
Interchanging geometry information in electron microscopy single particle analysis: mathematical context for the development of a standard.
- Carlos Oscar S. Sorzano
- Roberto Marabini
- J. Vargas
- J. Otón
- J. Cuenca-Alba
- A. Quintana
- J.M. de la Rosa-Trevín
- Jose Maria Carazo Garcia
Computational Methods For Three-dimensional Microscopy Reconstruction - 2014
- ORCID
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- Cuartil JCR: Q2 (2021)
- Impacto Normalizado por Categoría: 0,595 (2021)
- CiteScore: 2,2 (2020)
- SJR: 0,711 (2020)
- SNIP: 0,57 (2020)
- ORCID
- Scopus
- Web of Science
THREE-DIMENSIONAL RECONSTRUCTION BY THE DIRECT FOURIER METHOD: AN IMAGE SIMULATION APPROACH TO THE CASE OF INCOMPLETE DATA.
- Carazo J.M.
- Carrascosa J.
- Santisteban A.
1/12/1985
3-D ELECTRON MICROSCOPY AND INCOMPLETE ANGULAR COVERAGE: A RESTORATION SCHEME BASED ON PROJECTIONS ONTO CONVEX SETS.
- Carazo J.
ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings - 1/1/1988
- CiteScore: 4,6 (2020)
Parallel architecture for real-time speech recognition in Spanish
- Alexandres S.
- Moran J.
- Carazo J.
- Santos A.
ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings - 1/12/1990
- CiteScore: 4,6 (2020)
Image reconstruction on hypercube computers
- Zapata E.L.
- Benavides I.
- Rivera F.F.
- Bruguera J.D.
- Carazo J.M.
1/12/1990
Mapping strategies for sequential sequence comparison algorithms on LAN-based message passing architectures
- Trelles-Salazar O.
- Zapata E.L.
- Carazo J.M.
Lecture Notes In Computer Science - 1/1/1994
- CiteScore: 1,8 (2020)
- Scopus
- ORCID
3D reconstruction of macromolecules on multiprocessors
- Ujaldón M.
- Asenjo R.
- Zapata E.L.
- Cabaleiro J.C.
- Carazo J.M.
Proceedings of The 2nd Euromicro Workshop On Parallel and Distributed Processing, Pdp 1994 - 1/1/1994
- Scopus
- ORCID
3-DIMENSIONAL STRUCTURE OF THE DNAB HELICASE OLIGOMER FROM ESCHERICHIA-COLI BY ELECTRON-MICROSCOPY AND IMAGE-PROCESSING
- Carmen San Martín
- STAMFORD, NPJ
- DAMMEROVA, N
- DIXON, NE
- Jose Maria Carazo Garcia
Electron Microscopy 1994, Vols 3a and 3b - 1994
- ORCID
Electron tomography of biological specimens
- Marabini R.
- Carmen San Martin M.
- Carazo J.
Studies in Health Technology and Informatics - 1/1/1997
- CiteScore: 1,2 (2020)
- Scopus
- ORCID
Biological sequence analysis on distributed-shared memory multiprocessors
- Rodriguez A.
- de la Fraga L.G.
- Zapata E.L.
- Carazo J.M.
- Trelles O.
Proceedings of The 6th Euromicro Workshop On Parallel and Distributed Processing, Pdp 1998 - 1/1/1998
- Scopus
- ORCID
Este autor no tiene patentes.
A variant to the \'random approximation\' of the reference-free alignment algorithm
- Marco S.
- Chagoyen M.
- De La Fraga L.
- Carazo J.
- Carrascosa J.
Ultramicroscopy - 1/11/1996
- CiteScore: 5 (2020)
- Scopus
- ORCID
New phylogenetic venues opened by a novel implementation of the DNAml algorithm
- Trelles, O
- Ceron, C
- Wang, HC
- Dopazo, J
- Carazo, JM
Bioinformatics - 1/07/1998
10.1093/bioinformatics/14.6.544
- CiteScore: 9,9 (2020)
- Scopus
- ORCID
- Web of Science
Accessing Information on the Conformational Flexibility of Molecular Machines
- Carazo, JM
Structure - 1/02/2004
- Cuartil SJR: Q1
- CiteScore: 9 (2020)
- SJR: 4,47 (2004)
- SNIP: 1,507 (2004)
- Categorías SJR: Molecular Biology (Q1); Structural Biology (Q1)
- Web of Science
- Scopus
- ORCID
Biological structure determination by EM is well suited to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/06/2004
- Cuartil JCR: Q2 (2004)
- Cuartil SJR: Q2
- Factor Impacto JCR: 0,854 (2022)
- CiteScore: 2,1 (2020)
- SJR: 0,556 (2004)
- SNIP: 1,19 (2004)
- Categorías SJR: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- Web of Science
- ORCID
- Scopus
On the suitability of biological structure determination by electron microscopy to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/03/2005
- Cuartil JCR: Q3 (2005)
- Cuartil SJR: Q2
- Factor Impacto JCR: 0,5 (2022)
- Impacto Normalizado por Categoría: 0,442 (2005)
- CiteScore: 2,1 (2020)
- SJR: 0,6 (2005)
- SNIP: 1,719 (2005)
- Categorías SJR: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- ORCID
- Scopus
- Web of Science
Erratum: Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase (Proceedings of the National Academy of Sciences of the United States of America (2008) 23:51 (20191-20196))
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 7/4/2009
- Cuartil SJR: Q1
- Factor Impacto JCR: 9,432 (2009)
- CiteScore: 16,2 (2020)
- SJR: 7,025 (2009)
- SNIP: 2,563 (2009)
- Impacto JCR a 5 años: 10,312
- Categorías JCR: MULTIDISCIPLINARY SCIENCES
- Categorías SJR: Multidisciplinary (Q1)
Quantitative analysis of 3D alignment quality: its impact on soft-validation, particle pruning and homogeneity analysis
- Vargas J
- Melero R
- Gomez-Blanco J
- Carazo J
- Sorzano COS
11/2016
- ORCID
Dynamic Kinetochore Size Regulation Promotes Microtubule Capture And Chromosome Biorientation In Mitosis
- Sacristan C
- Ahmad M
- Keller J
- Fermie J
- Groenewold V
- Tromer E
- Fish A
- Melero R
- Carazo JM
- Klumperman J
- Musacchio A
- Perrakis A
- Kops GJ
03/2018
- ORCID
iNEXT: a European facility network to stimulate translational structural biology
- Rolf Boelens
- Dmitri Svergun
- Jan Ellenberg
- Cusack, Stephen
- Martin A. Walsh
- Banci, Lucia
- Harald Schwalbe
- Perrakis, Anastassis
- van Leeuwenhoek, Antoni
- Vladimir Sklenar
- Jose Maria Carazo Garcia
- Hartmut Oschkinat
- Thompson, Andrew
- Thunnissen, Marjolein
- Koster, Bram
- Gordon Leonard
- Brutscher, Bernhard
- Stuart, David I.
- Poul Nissen
- Wacklin, Hanna
- Perczel, Andras
- Margarida Archer
- Wierenga, Rik
- Spyroulias, Georgios A.
- Sussman, Joel
- iNEXT Consortium
Febs Letters - 1/06/2018
- ORCID
Índice h
Scopus: 52
Web of Science: 54
Índice i10
Scopus: 178
Web of Science: 192
Perfiles de autor
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Proyectos de investigación en la UAL
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Acrónimo 99109Desde: 2 de junio de 1999Hasta: 2 de junio de 2000Financiado por: Ministerio de Asuntos ExterioresImporte de financiación: 19.232,39 EURRol: Investigador