Carazo García, José María Autor
3D reconstruction of 2D crystals from projections in real space
2002 Ieee International Symposium on Biomedical Imaging, Proceedings - 1/1/2002
10.1109/isbi.2002.1029351 Ver en origen
- Scopus
- ORCID
- Web of Science
Volumetric constraints in 3D tomography applied to electron microscopy
- Marabini R.
- Herman G.
- Sorzano C.
- Carazo J.
2002 Ieee International Symposium on Biomedical Imaging, Proceedings - 1/1/2002
10.1109/isbi.2002.1029339 Ver en origen
- Scopus
- ORCID
- Web of Science
Image processing for Cellular tomography using soft X-rays
- Sorzano, C. O. S.
- Oton, J.
- Cuenca, J.
- Zaldivar-Perez, A.
- Caffarena, G.
- Sanchez-Jimenez, J.
- Messaoudi, C.
- Marco, S.
- Marabini, R.
- Carazo, J. M.
- IEEE
2012 9th Ieee International Symposium on Biomedical Imaging (Isbi) - 2012
- ORCID
- Web of Science
The Molecular Control of Calcitonin Receptor Signaling
- Dal Maso E.
- Glukhova A.
- Zhu Y.
- Garcia-Nafria J.
- Tate C.G.
- Atanasio S.
- Reynolds C.A.
- Ramírez-Aportela E.
- Carazo J.M.
- Hick C.A.
- Furness S.G.B.
- Hay D.L.
- Liang Y.L.
- Miller L.J.
- Christopoulos A.
- Wang M.W.
- Wootten D.
- Sexton P.M.
ACS Pharmacology and Translational Science - 8/2/2019
- Scopus
- ORCID
- Web of Science
New Tools and Pipelines for Continuous Heterogeneity Analysis from Cryo-EM using Normal Modes and 3D Zernike Polynomials
- Krieger, J.
- Herreros, D.
- Sorzano, C. O. S.
- Carazo, J. M.
Acta Crystallographica A-Foundation and Advances - 08/2022
- Factor Impacto JCR: 1,8 (2022)
- Impacto JCR a 5 años: 2,2
- Categorías JCR: CHEMISTRY, MULTIDISCIPLINARY
On the development of three new tools for organizing and sharing information in three-dimensional electron microscopy
- Marabini, R.
- MacIas, J.R.
- Vargas, J.
- Quintana, A.
- Sorzano, C.O.S.
- Carazo, J.M.
Acta Crystallographica Section D: Biological Crystallography - 1/05/2013
10.1107/s0907444913007038 Ver en origen
- Factor Impacto JCR: 7,232 (2013)
- CiteScore: 5,5 (2015)
- Impacto JCR a 5 años: 9,416
- Categorías JCR: CRYSTALLOGRAPHY
- Scopus
- ORCID
- Web of Science
Introducing robustness to maximum-likelihood refinement of electron-microsopy data
- Scheres, Sjors H. W.
- Carazo, Jose-Maria
Acta Crystallographica Section D - Structural Biology - 10/07/2009
- Factor Impacto JCR: 2,257 (2009)
- CiteScore: 5,5 (2015)
- Impacto JCR a 5 años: 2,013
- Categorías JCR: CRYSTALLOGRAPHY
- Scopus
- ORCID
- Web of Science
Principal component analysis is limited to low-resolution analysis in cryoEM
- Sorzano C.O.S.
- Carazo J.M.
Acta Crystallographica Section D Structural Biology - 1/06/2021
- Factor Impacto JCR: 5,699 (2021)
- Impacto JCR a 5 años: 6,009
- Categorías JCR: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Scopus
- ORCID
- Web of Science
Flexible workflows for on-the-fly electron-microscopy single-particle image processing using Scipion
- Maluenda D.
- Majtner T.
- Horvath P.
- Vilas J.
- Jiménez-Moreno A.
- Mota J.
- Ramírez-Aportela E.
- Sánchez-García R.
- Conesa P.
- Del Caño L.
- Rancel Y.
- Fonseca Y.
- Martínez M.
- Sharov G.
- García C.
- Strelak D.
- Melero R.
- Marabini R.
- Carazo J.
- Sorzano C.
Acta Crystallographica Section D-Structural Biology - 1/10/2019
- Cuartil JCR: Q2 (2019)
- Cuartil SJR: Q1
- Factor Impacto JCR: 5,266 (2019)
- Impacto Normalizado por Categoría: 0,902 (2019)
- CiteScore: 6,6 (2019)
- SJR: 3,906 (2019)
- SNIP: 1,429 (2019)
- Impacto JCR a 5 años: 3,181
- Categorías JCR: BIOPHYSICS
- Categorías SJR: Structural Biology (Q1)
- Scopus
- ORCID
- Web of Science
On bias, variance, overfitting, gold standard and consensus in single-particle analysis by cryo-electron microscopy
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Martínez M.
- Ramírez-Aportela E.
- Krieger J.
- Melero R.
- Cuervo A.
- Conesa J.
- Filipovic J.
- Conesa P.
- Del Caño L.
- Fonseca Y.C.
- Jiménez-de la Morena J.
- Losana P.
- Sánchez-García R.
- Strelak D.
- Fernández-Giménez E.
- de Isidro-Gómez F.P.
- Herreros D.
- Vilas J.L.
- Marabini R.
- Carazo J.M.
Acta Crystallographica Section D-Structural Biology - 1/4/2022
- Cuartil JCR: Q2 (2022)
- Factor Impacto JCR: 2,2 (2022)
- Impacto Normalizado por Categoría: 2,434 (2022)
- Impacto JCR a 5 años: 5,7
- Categorías JCR: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Scopus
- ORCID
- Web of Science
Soft X-ray tomography imaging for biological samples
- Otón J.
- Sorzano C.
- Chichón F.
- Carrascosa J.
- Carazo J.
- Marabini R.
Applied and Numerical Harmonic Analysis - 1/1/2014
- Cuartil JCR: Q2 (2014)
- Impacto Normalizado por Categoría: 0,156 (2014)
- CiteScore: 0,8 (2020)
- Scopus
- ORCID
- Web of Science
Interchanging geometry conventions in 3DEM: Mathematical context for the development of standards
- Sorzano C.
- Marabini R.
- Vargas J.
- Otón J.
- Cuenca-Alba J.
- Quintana A.
- de la Rosa-Trevín J.
- Carazo J.
Applied and Numerical Harmonic Analysis - 1/1/2014
- Cuartil JCR: Q2 (2014)
- Impacto Normalizado por Categoría: 0,312 (2014)
- CiteScore: 0,8 (2020)
- Scopus
- ORCID
- Web of Science
Interchanging geometry information in electron microscopy single particle analysis: mathematical context for the development of a standard.
- Carlos Oscar S. Sorzano
- Roberto Marabini
- J. Vargas
- J. Otón
- J. Cuenca-Alba
- A. Quintana
- J.M. de la Rosa-Trevín
- Jose Maria Carazo Garcia
Computational Methods For Three-dimensional Microscopy Reconstruction - 2014
- ORCID
Algorithms for three-dimensional reconstruction from the imperfect projection data provided by electron microscopy
- Carazo J.
- Herman G.
- Sorzano C.
- Marabini R.
Electron Tomography: Methods for Three-Dimensional Visualization of Structures in the Cell - 1/1/2006
- Scopus
- ORCID
High performance computing in electron microscope tomography of complex biological structures
- Fernández J.
- Lawrence A.
- Roca J.
- García I.
- Ellisman M.
- Carazo J.
Lecture Notes In Computer Science - 1/12/2003
- CiteScore: 1,8 (2020)
- SJR: 0,41 (2003)
- SNIP: 0,882 (2003)
- Scopus
- ORCID
A GA-optimized neural network for classification of biological particles from electron-microscopy images
- Merelo, JJ
- Prieto, A
- Moran, F
- Marabini, R
- Carazo, JM
- Mira, J
- MorenoDiaz, R
- Cabestany, J
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) - 1/1/1997
10.1007/bfb0032577 Ver en origen
- CiteScore: 1,8 (2020)
- Scopus
- ORCID
- Web of Science
Exploring the conformational flexibility of molecular machines
- Sjors Scheres
- Herman, Gabor T.
- Jose Maria Carazo Garcia
Mathematical Methods In Biomedical Imaging and Intensity-modulated Radiation Therapy (imrt) - 2008
- ORCID
AN INTRODUCTION TO MAXIMUM-LIKELIHOOD METHODS IN CRYO-EM
- Sigworth, Fred J.
- Doerschuk, Peter C.
- Carazo, Jose-Maria
- Scheres, Sjors H. W.
- Jensen, GJ
Methods in Enzymology - 1/1/2010
- Factor Impacto JCR: 1,626 (2010)
- CiteScore: 2,6 (2020)
- SJR: 1,408 (2010)
- SNIP: 0,493 (2010)
- Impacto JCR a 5 años: 2,185
- Categorías JCR: BIOCHEMICAL RESEARCH METHODS
- Scopus
- ORCID
- Web of Science
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods
- Sorzano C.O.S.
- Jiménez-Moreno A.
- Maluenda D.
- Ramírez-Aportela E.
- Martínez M.
- Cuervo A.
- Melero R.
- Conesa J.J.
- Sánchez-García R.
- Strelak D.
- Filipovic J.
- Fernández-Giménez E.
- de Isidro-Gómez F.
- Herreros D.
- Conesa P.
- del Caño L.
- Fonseca Y.
- de la Morena J.J.
- Macías J.R.
- Losana P.
- Marabini R.
- Carazo J.M.
Methods in Molecular Biology - 1/1/2021
- Cuartil JCR: Q2 (2021)
- Impacto Normalizado por Categoría: 0,595 (2021)
- CiteScore: 2,2 (2020)
- SJR: 0,711 (2020)
- SNIP: 0,57 (2020)
- Scopus
- ORCID
- Web of Science
Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy
- Sorzano C.
- De La Rosa Trevín J.
- Otón J.
- Vega J.
- Cuenca J.
- Zaldívar-Peraza A.
- Gómez-Blanco J.
- Vargas J.
- Quintana A.
- Marabini R.
- Carazo J.
Methods in Molecular Biology - 1/1/2013
- Cuartil SJR: Q3
- CiteScore: 2,2 (2020)
- SJR: 0,751 (2013)
- SNIP: 0,362 (2013)
- Categorías SJR: Genetics (Q3); Molecular Biology (Q3)
- Scopus
- ORCID
Extending the incorporation of superfamily structural information in the process of flexible fitting in 3D-EM
- Velázquez-Muriel J.
- Carazo J.
2005 Ieee Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts - 1/12/2005
- Categorías SJR: Engineering (miscellaneous)
- Scopus
- ORCID
Two-way clustering of gene expression profiles by sparse matrix factorization
- Pascual-Montano A.
- Carmona-Sáez P.
- Pascual-Marqui R.
- Tirado F.
- Carazo J.
2005 Ieee Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts - 1/12/2005
- Categorías SJR: Engineering (miscellaneous)
- Scopus
- ORCID
Molecular image registration using mutual information and differential evolution optimization
- Telenczuk, Bartosz
- Ledesma-Carbayo, Marta J.
- Velazquez-Muriel, Javier A.
- Sorzano, Carlos O. S.
- Carazo, Jose-Maria
- Santos, Andres
- IEEE
2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano To Macro - Proceedings - 17/11/2006
- Scopus
- ORCID
- Web of Science
Flexible image registration for the identification of best fitted protein models in 3D-EM maps
- Fernandez-de-Manuell, Laura
- Ledesma-Carbayol, Maria J.
- Atienza-Herrero, Julian
- Sorzano, Carlos O. S.
- Carazo, Jose-Maria
- Santos, Andres
- IEEE
2008 5th Ieee International Symposium On Biomedical Imaging: From Nano To Macro, Proceedings, Isbi - 10/05/2008
10.1109/isbi.2008.4541163 Ver en origen
- Scopus
- ORCID
- Web of Science
Extraction of biomedical events using case-based reasoning
- Mariana Neves
- Jose Maria Carazo Garcia
- Pascual-Montano, Alberto
2009 Biomedical Natural Language Processing Workshop, Bionlp 2009 - Companion Volume: Shared Task On Event Extraction - 2009
- ORCID
Modeling shape and topology of 3D images of biological specimens
- De-Alarcón P.
- Pascual-Montano A.
- Gupta A.
- Carazo J.
2014 22nd International Conference On Pattern Recognition (icpr) - 1/12/2002
- CiteScore: 2,9 (2019)
- SJR: 0,32 (2002)
- SNIP: 0,954 (2002)
- Categorías SJR: Computer Vision and Pattern Recognition
- Scopus
- ORCID
An image processing approach to the simulation of electron microscopy volumes of atomic structures
- Sorzano, C.O.S.
- Vargas, J.
- Oton, J.
- Abrishami, V.
- De La Rosa-Trevin, J.M.
- Del Riego, S.
- Fernandez-Alderete, A.
- Martinez-Rey, C.
- Marabini, R.
- Carazo, J.M.
2014 IEEE International Conference on Image Processing, ICIP 2014 - 28/01/2014
10.1109/icip.2014.7025420 Ver en origen
- Categorías SJR: Computer Vision and Pattern Recognition
- Scopus
- ORCID
- Web of Science
3DBionotes COVID-19 Structural Hub: a central resource for validation information and refined models
- Jose Ramon Macias
- Carolina Simon-Guerrero
- Erney Ramírez-Aportela
- Jose Luis Vilas Prieto
- Marta Martínez González
- Carlos Oscar S. Sorzano
- Jose Maria Carazo Garcia
21st European Conference On Computational Biology - 2022
- ORCID
Imaging Data: Adding a new type of annotations to 3DBionotes-WS
- Carolina Simón Guerrero
- Jose Ramon Macias
- Erney Ramírez-Aportela
- Jose Luis Vilas Prieto
- Marta Martinez Gonzalez
- Carlos Oscar S. Sorzano
- Jose Maria Carazo Garcia
21st European Conference On Computational Biology - 2022
- ORCID
Este autor no tiene patentes.
New phylogenetic venues opened by a novel implementation of the DNAml algorithm
- Trelles, O
- Ceron, C
- Wang, HC
- Dopazo, J
- Carazo, JM
Bioinformatics - 1/07/1998
10.1093/bioinformatics/14.6.544
- CiteScore: 9,9 (2020)
- Scopus
- ORCID
- Web of Science
Erratum: Image processing tools for the validation of CryoEM maps (Faraday Discussions (2022) DOI: 10.1039/D2FD00059H)
- Sorzano C.O.S.
- Vilas J.L.
- Ramírez-Aportela E.
- Krieger J.
- Del Hoyo D.
- Herreros D.
- Fernandez-Giménez E.
- Marchán D.
- De Isidro Gómez F.
- Macías J.R.
- Sánchez I.
- Del Caño L.
- Fonseca-Reyna Y.
- Conesa P.
- García-Mena A.
- Burguet J.
- García Condado J.
- Méndez García J.
- Martínez M.
- Muñoz-Barrutia A.
- Marabini R.
- Vargas J.
- Carazo J.M.
FARADAY DISCUSSIONS - 11/11/2022
- Factor Impacto JCR: 3,4 (2022)
- Impacto JCR a 5 años: 3,4
- Categorías JCR: CHEMISTRY, PHYSICAL
iNEXT: a European facility network to stimulate translational structural biology
- Rolf Boelens
- Dmitri Svergun
- Jan Ellenberg
- Cusack, Stephen
- Martin A. Walsh
- Banci, Lucia
- Harald Schwalbe
- Perrakis, Anastassis
- van Leeuwenhoek, Antoni
- Vladimir Sklenar
- Jose Maria Carazo Garcia
- Hartmut Oschkinat
- Thompson, Andrew
- Thunnissen, Marjolein
- Koster, Bram
- Gordon Leonard
- Brutscher, Bernhard
- Stuart, David I.
- Poul Nissen
- Wacklin, Hanna
- Perczel, Andras
- Margarida Archer
- Wierenga, Rik
- Spyroulias, Georgios A.
- Sussman, Joel
- iNEXT Consortium
Febs Letters - 1/06/2018
- ORCID
Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing
- James Michael Krieger
- Carlos Oscar S. Sorzano
- Jose Maria Carazo
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES - 10/08/2023
- Factor Impacto JCR: 4,9 (2023)
- CiteScore: 7,8 (2022)
- SJR: 1,154 (2022)
- SNIP: 1,263 (2022)
- Impacto JCR a 5 años: 5,6
- Categorías JCR: BIOCHEMISTRY & MOLECULAR BIOLOGY
- Scopus
- ORCID
- Web of Science
Improvements on marker-free images alignment for electron tomography
- C.O.S. Sorzano
- F. de Isidro-Gómez
- E. Fernández-Giménez
- D. Herreros
- S. Marco
- J.M. Carazo
- C. Messaoudi
Journal of Structural Biology: X - 24/05/2020
- Cuartil SJR: Q4
- Factor Impacto JCR: 2,867 (2020)
- Impacto JCR a 5 años: 4,474
- Categorías JCR: CELL BIOLOGY
- Categorías SJR: Structural Biology (Q4)
- Scopus
- ORCID
- Web of Science
On the suitability of biological structure determination by electron microscopy to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/03/2005
- Cuartil JCR: Q3 (2005)
- Cuartil SJR: Q2
- Factor Impacto JCR: 0,5 (2022)
- Impacto Normalizado por Categoría: 0,442 (2005)
- CiteScore: 2,1 (2020)
- SJR: 0,6 (2005)
- SNIP: 1,719 (2005)
- Categorías SJR: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- Scopus
- ORCID
- Web of Science
Biological structure determination by EM is well suited to grid computing
- Fernandez J.
- Bilbao-Castro J.
- Marabini R.
- Carazo J.
- Garcia I.
New Generation Computing - 1/06/2004
- Cuartil JCR: Q2 (2004)
- Cuartil SJR: Q2
- Factor Impacto JCR: 0,854 (2022)
- CiteScore: 2,1 (2020)
- SJR: 0,556 (2004)
- SNIP: 1,19 (2004)
- Categorías SJR: Computer Networks and Communications (Q2); Hardware and Architecture (Q2); Software (Q2); Theoretical Computer Science (Q2)
- Scopus
- ORCID
- Web of Science
Erratum: The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation (PLoS Pathog (2022) 18:7 (e1010631) DOI: 10.1371/journal.ppat.1010631)
- Ginex T.
- Marco-Marín C.
- Wieczór M.
- Mata C.
- Krieger J.
- Ruiz-Rodriguez P.
- López-Redondo M.L.
- Francés-Gómez C.
- Melero R.
- Sánchez-Sorzano C.Ó.
- Martínez M.
- Gougeard N.
- Forcada-Nadal A.
- Zamora-Caballero S.
- Gozalbo-Rovira R.
- Sanz-Frasquet C.
- Arranz R.
- Bravo J.
- Rubio V.
- Marina A.
- Geller R.
- Comas I.
- Gil C.
- Coscolla M.
- Orozco M.
- Llácer J.L.
- Carazo J.M.
PLoS Pathogens - 1/11/2022
- Factor Impacto JCR: 6,7 (2022)
- CiteScore: 10,5 (2021)
- SJR: 2,596 (2021)
- SNIP: 1,618 (2021)
- Impacto JCR a 5 años: 6,7
- Categorías JCR: VIROLOGY
The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: the case of the spike A222V mutation
- Tiziana Ginex
- Clara Marco-Marín
- Miłosz Wieczór
- Carlos P. Mata
- James Krieger
- Maria Luisa López-Redondo
- Clara Francés-Gómez
- Paula Ruiz-Rodriguez
- Roberto Melero
- Carlos Óscar Sánchez-Sorzano
- Marta Martínez
- Nadine Gougeard
- Alicia Forcada-Nadal
- Sara Zamora-Caballero
- Roberto Gozalbo-Rovira
- Carla Sanz-Frasquet
- Jeronimo Bravo
- Vicente Rubio
- Alberto Marina
- Ron Geller
- Iñaki Comas
- Carmen Gil
- Mireia Coscolla
- Modesto Orozco
- José Luis Llácer
- José-Maria Carazo
PLoS Pathogens - 7/12/2021
- Factor Impacto JCR: 7,464 (2021)
- CiteScore: 10,5 (2021)
- SJR: 2,596 (2021)
- SNIP: 1,618 (2021)
- Impacto JCR a 5 años: 7,913
- Categorías JCR: VIROLOGY
- Scopus
- ORCID
- Web of Science
Erratum: Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase (Proceedings of the National Academy of Sciences of the United States of America (2008) 23:51 (20191-20196))
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 7/4/2009
- Cuartil SJR: Q1
- Factor Impacto JCR: 9,432 (2009)
- CiteScore: 16,2 (2020)
- SJR: 7,025 (2009)
- SNIP: 2,563 (2009)
- Impacto JCR a 5 años: 10,312
- Categorías JCR: MULTIDISCIPLINARY SCIENCES
- Categorías SJR: Multidisciplinary (Q1)
Índice h
Scopus: 52
Web of Science: 54
Índice i10
Scopus: 178
Web of Science: 192
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Proyectos de investigación en la UAL
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Acrónimo 99109Desde: 2 de junio de 1999Hasta: 2 de junio de 2000Financiado por: Ministerio de Asuntos ExterioresImporte de financiación: 19.232,39 EURRol: Investigador